FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve804.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve804.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3606
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT266974.01552967276761No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA2216.12867443150305No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG511.4143094841930115No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT371.0260676650027731No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA350.9706045479755963No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT270.7487520798668885No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT270.7487520798668885No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT260.7210205213533No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT210.5823627287853578No Hit
CGGAAGGATCATTACCACACCAAAAACAATTCACGTGAACCGTCAGAAAT170.4714364947310039No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT160.44370493621741547No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT150.4159733777038269No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG140.3882418191902385No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT120.33277870216306155No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT120.33277870216306155No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT100.27731558513588467No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT100.27731558513588467No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT100.27731558513588467No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT90.24958402662229617No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT80.22185246810870773No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACATGAACCGTCAGAAAT80.22185246810870773No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT80.22185246810870773No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC80.22185246810870773No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT80.22185246810870773No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT70.19412090959511924No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT70.19412090959511924No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT70.19412090959511924No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT70.19412090959511924No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT70.19412090959511924No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT70.19412090959511924No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCCGTACTG60.16638935108153077No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT60.16638935108153077No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT60.16638935108153077No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA60.16638935108153077No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCTGAAAT50.13865779256794233No Hit
CGGAAGGATCATACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA50.13865779256794233No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC50.13865779256794233No Hit
CGGAAGGATCATTACCACACCAGAAACAATCCACGTGAACCGTCAGAAAT40.11092623405435387No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCATGTGAACCGTCAGAAAT40.11092623405435387No Hit
CGGAAGGATTATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.11092623405435387No Hit
CGGAAGGATCATTATCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.11092623405435387No Hit
CGGAAGGTTCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.11092623405435387No Hit
TGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT40.11092623405435387No Hit
CGGAAGGATCATTACCCCACCAAAAACAATCCACGTGAACCGTCAGAAAT40.11092623405435387No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATCAA40.11092623405435387No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)