FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve801.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve801.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2336
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG132056.5068493150685No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT2279.717465753424657No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTGT411.75513698630137No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT411.75513698630137No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA361.5410958904109588No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTCAATA361.5410958904109588No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTG321.36986301369863No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA301.2842465753424657No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTACCACGTGAATCTGTACTG291.2414383561643836No Hit
CGGAAGGATCATTACCACTTGCAGCAGTGGATGTCTAGGCTCTGTCTCTT271.1558219178082192No Hit
CGGAAGGATCATTACCACGGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA200.8561643835616438No Hit
CGGAAGGATCATTACCACCTCCAGCAGTGGATGTCTAGGCTCTGTCTCTT190.8133561643835616No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC180.7705479452054794No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT180.7705479452054794No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA150.6421232876712328No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA120.5136986301369862No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.5136986301369862No Hit
CGGAAGGATCATTACCACACCAATAAAACTTACCACGTGAATCTGTACTG110.4708904109589041No Hit
CGGAAGGATCATTACCACACCCGGGATCCTCGATCTTTCTCCTAGGTTAA80.3424657534246575No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTG80.3424657534246575No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACTGTCAGAAAT70.2996575342465753No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT60.2568493150684931No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAGTCTGTACTG60.2568493150684931No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT60.2568493150684931No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTG60.2568493150684931No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGCGAATCTGTACTG50.21404109589041095No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTGTT50.21404109589041095No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCGCGTGAATCTGTACTG50.21404109589041095No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT50.21404109589041095No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACCG50.21404109589041095No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATATGTACTG50.21404109589041095No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTACCACGTGAATCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGAATCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCCGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTACCACGTGAATCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAGAAAAACTTACCACGTGAATCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAGAAACTTACCACGTGAATCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTTAATCTGTACTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTGCTG40.17123287671232876No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTACCACGTGAATCTGTACT30.12842465753424656No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTGCCACGTGAATCTGTACTG30.12842465753424656No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACTACGTGAATCTGTACTG30.12842465753424656No Hit
CGGAAGGATCATTACCACACCAAAAAGACTTACCACGTGAATCTGTACTG30.12842465753424656No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGTATCTGTACTG30.12842465753424656No Hit
CGGAAGGATCATTACCACGTCGTCTGCAGCAGTGGATGTCTAGGCTCTGT30.12842465753424656No Hit
CGGAAGGATCATTACCACACAAAAAAACTTACCACGTGAATCTGTACTGT30.12842465753424656No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCTCGTGAATCTGTACTG30.12842465753424656No Hit
CCGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG30.12842465753424656No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)