FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve800.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve800.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2423
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT75531.159719356170037No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA47119.43871234007429No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA2269.327280231118449No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA2018.2955014444903No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA923.7969459347915806No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA773.1778786628146927No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTT301.2381345439537763No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT230.9492364836978952No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA230.9492364836978952No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA150.6190672719768882No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTT130.5365249690466364No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC130.5365249690466364No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA120.4952538175815105No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTACCACGTGAATCTGTACTT110.4539826661163846No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTACCACGTGAATCTGTACTT100.41271151465125877No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA90.37144036318613294No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAAAT90.37144036318613294No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTTTC80.33016921172100705No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTCAAAAAA80.33016921172100705No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA70.2888980602558811No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA70.2888980602558811No Hit
CGGAAGGATCATTAACACACCAAAAAAACTATCCACGTGAACCGTCAAAA70.2888980602558811No Hit
CGGAAGGATCATTACCACACCTTAAAACTATCCACGTGAACCGTTTGTAC60.24762690879075525No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACAGTTAACCAA60.24762690879075525No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT60.24762690879075525No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGAATCTGTACTT50.20635575732562939No Hit
CGGAAGGATCATTAACACACCTAAAACTATCCACGTGAACCGTTAACCAA50.20635575732562939No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTT50.20635575732562939No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGCCAAAA40.16508460586050352No Hit
CGGAAGGATCATTAACACGCCAAAAACTATCCACGTGAACCGTTAACCAA40.16508460586050352No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCTACGTGAACCGTCAAAA40.16508460586050352No Hit
CGGAAGGATCATTACCACGCCTAAAACTATCCACGTGAACCGTTAACCAA40.16508460586050352No Hit
CGGAAGGATCATTACCACGCCAAAAACTATACACGTGAACCGTTAACCAA40.16508460586050352No Hit
CGGAAGGATCATTACCACACCAAAAAGACTATCCACGTGAACCGTCAAAA40.16508460586050352No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTGTA40.16508460586050352No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACCT40.16508460586050352No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTATCCACGTGAACCGTCAAAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTGCTT30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTACCACGTGAATCTGTACTT30.12381345439537762No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAATCGTTAACCAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATATGTACTT30.12381345439537762No Hit
CGGAAGGATCATTACCACGCAAAAAACTATCCACGTGAACCGTTAAGCAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAG30.12381345439537762No Hit
CGGAAGGATCATTACCACGCCAAGAACTATCCACGTGAACCGTTAATCAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCCGTACTT30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCGCGTGAATCTGTACTT30.12381345439537762No Hit
CGGAAGGATCATTACCACACCTAAAACTATACACGTGAACCGTTAACCAA30.12381345439537762No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAG30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCACCACGTGAATCTGTACTT30.12381345439537762No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAACCAA30.12381345439537762No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAACC30.12381345439537762No Hit
CGGAAGGATCATTACCACGCCAAAGACTATCCACGTGAACCGTTAAGCAA30.12381345439537762No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)