FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve798.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve798.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1404
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT84760.327635327635335No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT1077.621082621082621No Hit
CGGAAGGATCATTACCACCTCCAGCAGTGGATGTCTAGGCTCTGTCTCTT533.774928774928775No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACGATCTACGATCTC402.849002849002849No Hit
CGGAAGGATCATTACCACATCTCCGCAGCAGTGGATGTCTAGGCTCTGTC332.3504273504273505No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA241.7094017094017095No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT211.4957264957264957No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT120.8547008547008548No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT90.641025641025641No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT90.641025641025641No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT90.641025641025641No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG90.641025641025641No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT80.5698005698005698No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT80.5698005698005698No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT70.49857549857549854No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC70.49857549857549854No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT60.4273504273504274No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT50.3561253561253561No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT50.3561253561253561No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC40.2849002849002849No Hit
CGGAAGGATCATTACCACATCTGGCTGCCGACCAGCAGTGGATGTCTAGG30.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT30.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT30.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT30.2136752136752137No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.2136752136752137No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT30.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT30.2136752136752137No Hit
CGGAAGGATCATTACCACATCTCCTCAGCAGTGGATGTCTAGGCTCTGTC30.2136752136752137No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT30.2136752136752137No Hit
CGGAAGGATCATTACCACCTACAGCAGTGGATGTCTAGGCTCTGTCTCTT30.2136752136752137No Hit
CGGAAGGAGCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT20.14245014245014245No Hit
CGGAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT20.14245014245014245No Hit
CGGAAGGATCATTACTACACCAAAAACTATCCACGTGAACCACTTTGTAT20.14245014245014245No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT20.14245014245014245No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATT20.14245014245014245No Hit
CGGAAGGATCATTAACACCTCCAGCAGTGGATGTCTAGGCTCTGTCTCTT20.14245014245014245No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT20.14245014245014245No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT20.14245014245014245No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT20.14245014245014245No Hit
CGTAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT20.14245014245014245No Hit
CGGAAGGATCATTACCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCT20.14245014245014245No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCTCTT20.14245014245014245No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.14245014245014245No Hit
GGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT20.14245014245014245No Hit
CGGAAGGATCATTACCAACTCCAGCAGTGGATGTCTAGGCTCTGTCTCTT20.14245014245014245No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT20.14245014245014245No Hit
CGGAAGGATCATTACCACATCTCCGAGCTCACGAGACCAGCAGTGGATGT20.14245014245014245No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)