FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve795.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve795.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1735
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC97756.31123919308357No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTATCA26715.389048991354468No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT663.804034582132565No Hit
CGGAAGGATCATTACCACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT341.9596541786743515No Hit
CGGAAGGATCATTACCACATCTCCGGCCCACGAGACCAGCAGTGGATGTC341.9596541786743515No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC321.8443804034582134No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC201.1527377521613833No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC110.6340057636887608No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC100.5763688760806917No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC80.46109510086455335No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC80.46109510086455335No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC80.46109510086455335No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC70.4034582132564841No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA70.4034582132564841No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC60.345821325648415No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC50.2881844380403458No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC50.2881844380403458No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC50.2881844380403458No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC50.2881844380403458No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC40.23054755043227668No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.23054755043227668No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC40.23054755043227668No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC40.23054755043227668No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATCAA40.23054755043227668No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC40.23054755043227668No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC30.1729106628242075No Hit
CGGAAGGATCATTGCCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAGCTGTATCA30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTAACAAC30.1729106628242075No Hit
CGGAAGGATCATTACCACACATAAAAAAACTTTCCACGTGAACTGTATCA30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTATCG30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTCTCCACGTGAACTGTATCA30.1729106628242075No Hit
CGGAAGGATCATTACCACCCCTAAAAAAACTTTCCACGTGAACTGTATCA30.1729106628242075No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCATGTGAACTGTATCA20.11527377521613834No Hit
CGGAAGGATCATTAACACCGTCAGCAGTGGATGTCTAGGCTCTGTCTCTT20.11527377521613834No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.11527377521613834No Hit
GGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTATCAA20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC20.11527377521613834No Hit
CGGAAGGATCATTACCACTCCGAGCCCACGAGACCAGCAGTGGATGTCTA20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC20.11527377521613834No Hit
CGGAAGGATCATTACCACATCTCCTGCCCACGAGACCAGCAGTGGATGTC20.11527377521613834No Hit
CGGAAGGATCATTAACACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT20.11527377521613834No Hit
CGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAAAAACTTTCCACGTGAACTGTATC20.11527377521613834No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC20.11527377521613834No Hit
CGGAAGGATCATTACCACATCCCCGGCCCACGAGACCAGCAGTGGATGTC20.11527377521613834No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC20.11527377521613834No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)