FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve790.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve790.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2931
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA114739.13340156943023No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC73725.14500170590242No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT34111.63425452064142No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAAGCAA732.490617536676902No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT331.1258955987717503No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA321.0917775503241216No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA260.8870692596383487No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA250.8529512111907198No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA180.6141248720573182No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTATCAA160.5458887751620608No Hit
CGGAAGGATCATTAACACACCAAAAAAACTATCCACGTGAACCGTCAAAA150.511770726714432No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC130.44353462981917435No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA100.34118048447628796No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA90.3070624360286591No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA80.2729443875810304No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA70.2388263391334016No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA70.2388263391334016No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC70.2388263391334016No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCGAAA60.2047082906857728No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.2047082906857728No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT60.2047082906857728No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA50.17059024223814398No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCAAAAA50.17059024223814398No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA50.17059024223814398No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA50.17059024223814398No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA50.17059024223814398No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT50.17059024223814398No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGCGAACCGTCAAAA50.17059024223814398No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGCCAAAA40.1364721937905152No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC40.1364721937905152No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC40.1364721937905152No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC40.1364721937905152No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT40.1364721937905152No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT40.1364721937905152No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.1364721937905152No Hit
CGGAAGGATCATTACCAAACCAAAAAAACTATCCACGTGAACCGTCAAAA40.1364721937905152No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCGCGTGAACCGTCAAAA40.1364721937905152No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC40.1364721937905152No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTATCCACGTGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGCTTTGT30.1023541453428864No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAAACCATCCACGTGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAGAAAACTATCCACGTGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAG30.1023541453428864No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC30.1023541453428864No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAGAAACTATCCACGTGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATACCACACCAAAAAAACTATCCACGTGAACCGTCAAAAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTATCAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACATGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAGACTATCCACGTGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT30.1023541453428864No Hit
CGGAAGGATCATTACCCCACCAAAAAAACTATCCACGTGAACCGTCAAAA30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT30.1023541453428864No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC30.1023541453428864No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)