FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve782.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve782.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1870
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC108257.86096256684492No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA21211.336898395721926No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC603.2085561497326207No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTTTCAAC492.620320855614973No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTTTCAAC361.9251336898395723No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTTTCAAC321.7112299465240641No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTTTCAAC160.8556149732620321No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT150.8021390374331552No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTCCAAC110.5882352941176471No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA100.53475935828877No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA90.4812834224598931No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT90.4812834224598931No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTTTCAAC70.37433155080213903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCGAC70.37433155080213903No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA70.37433155080213903No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTTTCAAC60.32085561497326204No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACTGTTTCAAC60.32085561497326204No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTTTCAAC50.267379679144385No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTTTCAAC50.267379679144385No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTTTCAACCA50.267379679144385No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTTTCAAC50.267379679144385No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCTTCAAC50.267379679144385No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC50.267379679144385No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA50.267379679144385No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTTCAAC50.267379679144385No Hit
CGGAAGGATCATAACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACATCTCCAGCAGTGGATGTCTAGGCTCTGTCTC40.21390374331550802No Hit
CGGAAGAATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAGC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTTTCAAC40.21390374331550802No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA30.16042780748663102No Hit
CGGAATGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC30.16042780748663102No Hit
CGGAAGGATCATTACCACATCTAAAAACTTTCCACGTGAACCGTTTCAAC30.16042780748663102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGATTCAAC30.16042780748663102No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC30.16042780748663102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTAACCGTTTCAAC30.16042780748663102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA30.16042780748663102No Hit
CGGAAGGATATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAACC30.16042780748663102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGACGTTTCAAC20.10695187165775401No Hit
CAGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAAACGTTTCAAC20.10695187165775401No Hit
CGGAAGGATATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC20.10695187165775401No Hit
CGGAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC20.10695187165775401No Hit
CGGAAGGATCATTACCACACATAAAAAATTTCCACGTGAACCGTTTCAAC20.10695187165775401No Hit
TGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTTAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC20.10695187165775401No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTTCCAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA20.10695187165775401No Hit
CGGAAGGATCATTAACACACATAAAAACTTTCCACGTGAACCGTATCAAA20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGAGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAACC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTTTCAAC20.10695187165775401No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTTTCAACC20.10695187165775401No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA20.10695187165775401No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATTTCAAC20.10695187165775401No Hit
CGGAAGGAGCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTCAAC20.10695187165775401No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)