FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve776.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve776.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2175
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT61128.091954022988507No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA52224.0No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAAAATGTACTGTC1758.045977011494253No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA994.551724137931035No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATCC592.7126436781609193No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC592.7126436781609193No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC542.4827586206896552No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTCAATA391.7931034482758619No Hit
CGGAAGGATCATTACCACACCAAAAAATATTCATGAGAAACTTTTCGTTA371.7011494252873565No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC351.6091954022988506No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA190.8735632183908045No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGCAA190.8735632183908045No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA120.5517241379310345No Hit
CGGAAGGATCATTAACACACCAAAAAAACTATCCACGTGAACCGTCAAAA120.5517241379310345No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT110.5057471264367815No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT110.5057471264367815No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT100.45977011494252873No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA90.41379310344827586No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA90.41379310344827586No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAAAATGTACTGTC80.367816091954023No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT70.3218390804597701No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA60.27586206896551724No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAATCAA60.27586206896551724No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT60.27586206896551724No Hit
CGGAAGGATCATTACCACACCGAAAAAACTATCCACGTGAACCGTCAAAA60.27586206896551724No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTAATAAT50.22988505747126436No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA50.22988505747126436No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT50.22988505747126436No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGCGAACCGTCAAAA50.22988505747126436No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA40.1839080459770115No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAAC40.1839080459770115No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTATCCACGTGAACCGTCAAAA40.1839080459770115No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT40.1839080459770115No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA40.1839080459770115No Hit
CGGAAGGATCATTAACACACCAAAAACAACCCACGTGAAAATGTACTGTC40.1839080459770115No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.1839080459770115No Hit
CGGAAGGATCATTACCACACAAAAAACAACCCACGTGAAAATGTACTGTC40.1839080459770115No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAGAAAACTATCCACGTGAACCGTCAAAA30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATTC30.13793103448275862No Hit
CGGAAGGATCTTACCACACCAAAAACAACCCACGTGAAAATGTACTGTCT30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT30.13793103448275862No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAATCGTTCAATA30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACAGTCAAAA30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAGCAACCCACGTGAAAATGTACTGTC30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT30.13793103448275862No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAAC30.13793103448275862No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAATC30.13793103448275862No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)