FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve773.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve773.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4516
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA192242.559787422497784No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA143331.731620903454385No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT4179.233835252435783No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAA280.6200177147918512No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC240.5314437555358724No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTACATA190.42072630646589904No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA150.33215234720992026No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA140.3100088573959256No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTACATA130.28786536758193093No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTACATA130.28786536758193093No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTACATA130.28786536758193093No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT120.2657218777679362No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA120.2657218777679362No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTACATA110.24357838795394152No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAA110.24357838795394152No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT100.22143489813994688No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT100.22143489813994688No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA100.22143489813994688No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA90.19929140832595219No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA90.19929140832595219No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTACATA90.19929140832595219No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA80.1771479185119575No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC80.1771479185119575No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA80.1771479185119575No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA80.1771479185119575No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA80.1771479185119575No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA80.1771479185119575No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTACATA70.1550044286979628No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT70.1550044286979628No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTACATACC70.1550044286979628No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA60.1328609388839681No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA60.1328609388839681No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT60.1328609388839681No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA60.1328609388839681No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTACATA60.1328609388839681No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA60.1328609388839681No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA50.11071744906997344No Hit
CGGAAGGATCATTACCACACCAAGAAACTATCCACGTGAACCGTTACATA50.11071744906997344No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA50.11071744906997344No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC50.11071744906997344No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTACATA50.11071744906997344No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTACATA50.11071744906997344No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC50.11071744906997344No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTACATAC50.11071744906997344No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT50.11071744906997344No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG50.11071744906997344No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT50.11071744906997344No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC50.11071744906997344No Hit
CGTAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.11071744906997344No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)