FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve772.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve772.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2256
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT192485.28368794326241No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT251.1081560283687943No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA220.975177304964539No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT200.8865248226950355No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGCTTTGTAT160.7092198581560284No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT90.39893617021276595No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG80.3546099290780142No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT70.31028368794326244No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT70.31028368794326244No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT70.31028368794326244No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT70.31028368794326244No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT70.31028368794326244No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT70.31028368794326244No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT60.26595744680851063No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT60.26595744680851063No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT60.26595744680851063No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCGCTTTGTAT60.26595744680851063No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT50.22163120567375888No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT40.1773049645390071No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT40.1773049645390071No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA40.1773049645390071No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT40.1773049645390071No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCGCTTTGTAT30.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC30.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA30.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTCGTAT30.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT30.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCGCTTTGTAT30.13297872340425532No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT30.13297872340425532No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)