FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve771.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve771.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4176
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC96623.132183908045977No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA88421.168582375478927No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT58413.984674329501914No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT53512.811302681992338No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT2004.789272030651341No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC972.3227969348659006No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA310.7423371647509579No Hit
CGGAAGGATCATTACCACTAAGAACAGCAGTGGATGTCTAGGCTCTGTCT300.7183908045977011No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC290.6944444444444444No Hit
CGGAAGGATCATTACCACACCTAAAGACTTCCCCCGTGAACCGTATCAAC190.4549808429118774No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC180.43103448275862066No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT150.35919540229885055No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT120.28735632183908044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA110.26340996168582376No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCGTGAACCGTATCAACC100.23946360153256704No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT100.23946360153256704No Hit
CGGAAGGATCATTACCACCTAAAAACTTCCCCCGTGAACCGTATCAACCC100.23946360153256704No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCGTTA90.21551724137931033No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT90.21551724137931033No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC90.21551724137931033No Hit
CGGAAGGATCATTACCACACCTAAAAACTCCCCCCGTGAACCGTATCAAC90.21551724137931033No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA70.16762452107279693No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC70.16762452107279693No Hit
CGGAAGGATCATTACCACACATAAAAACTTCCCCCGTGAACCGTATCAAC70.16762452107279693No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCCCGTGAACCGTATCAAC70.16762452107279693No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACTGTCGTTAT60.14367816091954022No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA60.14367816091954022No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT60.14367816091954022No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACTGTCGTTAT60.14367816091954022No Hit
CGGAAGGATCATTACCACACCTAAAACTTCCCCCGTGAACCGTATCAACC60.14367816091954022No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT60.14367816091954022No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACTGTCGTTATTT60.14367816091954022No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT60.14367816091954022No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA50.11973180076628352No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA50.11973180076628352No Hit
CGGAAGGATCATTAACACACCTAAAAACTTCCCCCGTGAACCGTATCAAC50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTTTAT50.11973180076628352No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT50.11973180076628352No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT50.11973180076628352No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT50.11973180076628352No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAAACGTATCAAC50.11973180076628352No Hit
CGGAAGGATCATTACCACACCCAAAAACTTCCCCCGTGAACCGTATCAAC50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACTGTCGTTAT50.11973180076628352No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACTGTCGTTAT50.11973180076628352No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)