FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve770.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve770.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3416
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA96028.10304449648712No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT64918.998829039812644No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA56516.539812646370024No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC1594.65456674473068No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTGT1534.478922716627634No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC772.2540983606557377No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTATCCACGTGAACCGTCAAA511.4929742388758782No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTACAAT330.9660421545667448No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTGTAA240.702576112412178No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA190.5562060889929743No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTATAAT180.5269320843091335No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAC180.5269320843091335No Hit
CGGAAGGATCATTACCACCAAAAAAACTTTCCACGTGAACCGTTGTAACT160.468384074941452No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAGCCGTTGTAA150.43911007025761123No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTAAAAA150.43911007025761123No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA110.32201405152224827No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA110.32201405152224827No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG90.26346604215456676No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTTCCACGTGAACCGTTGTAA90.26346604215456676No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA80.234192037470726No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTAAACCGTCAAAA80.234192037470726No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT80.234192037470726No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTTCCACGTGAACCGTTGTAA70.20491803278688525No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAGC70.20491803278688525No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACCAAAAAAACTGTCCACGTGAACCGTCAAAA60.1756440281030445No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT60.1756440281030445No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT60.1756440281030445No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGCAA60.1756440281030445No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT60.1756440281030445No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA60.1756440281030445No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTATAA50.14637002341920377No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT50.14637002341920377No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT50.14637002341920377No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTGTAA50.14637002341920377No Hit
CGGAAGGATCATTAACACACCAAAAAAACTATCCACGTGAACCGTCAAAA50.14637002341920377No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAAGCAA40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAAAACCATCCACGTGAACCGTCAAAA40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCAAAA40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCATGTGAACCGTTGTAA40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTACAA40.117096018735363No Hit
CGGAAGGATCATTACCACATCAAAAAAACTATCCACGTGAACCGTCAAAA40.117096018735363No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAAGACTATCCACGTGAACCGTCAAAA40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTGTAACT40.117096018735363No Hit
CGGAAGGATCATTACCACACCAAAAACGATCCACGTGAACCGTCAGAAAT40.117096018735363No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)