FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve769.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve769.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4497
Sequences flagged as poor quality0
Sequence length301
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT215948.009784300644874No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACCGTATCA3417.582832999777629No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA3317.36046253057594No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA2695.9817656215254615No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT2034.514120524794308No Hit
CGGAAGGATCATTACCACACCTAAAAAAAACTTTCCACGTGAACCGTATC821.8234378474538582No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA611.3564598621303092No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA521.156326439848788No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT471.0451412052479432No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT360.8005336891260841No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT290.644874360684901No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT250.555926173004225No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT220.4892150322437181No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT200.4447409384033801No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG190.42250389148321105No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTACATAC160.355792750722704No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT160.355792750722704No Hit
CGGAAGGATCATTACCACACCAAAAAATATTCATGAGAAACTTTTCGTTA150.333555703802535No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTGGTA150.333555703802535No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA140.311318656882366No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT140.311318656882366No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTACATA140.311318656882366No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT120.26684456304202797No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT120.26684456304202797No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAAAAAA110.24460751612185905No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA110.24460751612185905No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCGCGTGAACCGTCAGAAAT110.24460751612185905No Hit
CGGAAGGATCATTACCACCTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC110.24460751612185905No Hit
CGGAAGGATCATTAACACACCTAAAAAAACTTTCCACGTGAACCGTATCA100.22237046920169004No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT100.22237046920169004No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT100.22237046920169004No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTATCAACC90.20013342228152103No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT90.20013342228152103No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT90.20013342228152103No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT90.20013342228152103No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT90.20013342228152103No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT90.20013342228152103No Hit
CGGAAGGATCATACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA80.177896375361352No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT80.177896375361352No Hit
CGGAAGGATCATTACCACACATAAAAAAACTTTCCACGTGAACCGTATCA80.177896375361352No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT80.177896375361352No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT70.155659328441183No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA60.13342228152101399No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT60.13342228152101399No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT60.13342228152101399No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTACATA60.13342228152101399No Hit
CGGAAGGATCATTACCACACCAAAACCAATCCACGTGAACCGTCAGAAAT60.13342228152101399No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT50.11118523460084502No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT50.11118523460084502No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)