FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve768.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve768.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3018
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA107835.71901921802518No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA47215.63949635520212No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAGCAA35211.663353214049039No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTCAATA2337.7203445990722335No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1264.174950298210735No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC371.2259774685222002No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAAC270.8946322067594433No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA220.7289595758780649No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA200.6626905235255135No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA180.5964214711729622No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA180.5964214711729622No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAGC180.5964214711729622No Hit
CGGAAGGATCATTAACACACCAAAAAAACTATCCACGTGAACCGTCAAAA140.46388336646785955No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA130.4307488402915839No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT130.4307488402915839No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGTTAAGCAA120.3976143141153081No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA120.3976143141153081No Hit
CGGAAGGATCATTACCACCCACCCAGAGACAGCAGTGGATGTCTAGGCTC110.36447978793903246No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA110.36447978793903246No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA100.33134526176275675No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT90.2982107355864811No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTATCCACGTGAACCGTCAAAA90.2982107355864811No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC90.2982107355864811No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA80.26507620941020543No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC80.26507620941020543No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGCCAAAA70.23194168323392977No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA70.23194168323392977No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTCAAAA60.19880715705765406No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA60.19880715705765406No Hit
CGGAAGGATCATTACCACACCAAAAAGACTATCCACGTGAACCGTCAAAA60.19880715705765406No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAAGCAA50.16567263088137837No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAG50.16567263088137837No Hit
CGGAAGGATCATTACCACACCAAAGAAACTATCCACGTGAACCGTCAAAA50.16567263088137837No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCTGTACTGT50.16567263088137837No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA40.13253810470510272No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGTTAAGCAA40.13253810470510272No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCGAAA40.13253810470510272No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTAAACA40.13253810470510272No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAACA40.13253810470510272No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA40.13253810470510272No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA40.13253810470510272No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAATCGTTCAAT40.13253810470510272No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)