FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve767.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve767.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3870
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA183847.49354005167959No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA94124.315245478036175No Hit
CGGAAGGATCATTACCACACCTAAAAAAACGTCCACGTGAACTGTATCAA1754.521963824289406No Hit
CGGAAGGATCATTACCACACGTAAAAAAACGTCCACGTGAACTGTATCAA1132.9198966408268734No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG681.757105943152455No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA541.3953488372093024No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC411.0594315245478036No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA300.7751937984496124No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATCAAA240.6201550387596899No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAAATGTATCAAA220.5684754521963824No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA210.5426356589147286No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA180.46511627906976744No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATCAAA180.46511627906976744No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATCAAA150.3875968992248062No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA150.3875968992248062No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAT150.3875968992248062No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA150.3875968992248062No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTTCCACGTGAACCGTTGTAA140.3617571059431524No Hit
CGGAAGGATCATTACCACACCTAAAAAACGTCCACGTGAACTGTATCAAA120.31007751937984496No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATCAAA120.31007751937984496No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATCAAA80.20671834625322996No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTATCACGTGAATCTGTACTG60.15503875968992248No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAACTGTATCAAA60.15503875968992248No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA60.15503875968992248No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC60.15503875968992248No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGCTGTAA50.12919896640826875No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAG50.12919896640826875No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTTGTAAT50.12919896640826875No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGCATCAAA50.12919896640826875No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTCCACGTGAACTGTATCAAA50.12919896640826875No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGCGAACCGTTGTAA50.12919896640826875No Hit
CGGAAGGATCATTATCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA40.10335917312661498No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA40.10335917312661498No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATCAAA40.10335917312661498No Hit
CGGAAGGATTATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA40.10335917312661498No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA40.10335917312661498No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTACCAAA40.10335917312661498No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCACGTGAACTGTATCAAA40.10335917312661498No Hit
CGGAAGGATCATTACCACATAAGCAGTGGATGTCTAGGCTCTGTCTCTTA40.10335917312661498No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA40.10335917312661498No Hit
CGGAAGGATCATACCACACCTAAAAAACTTCCACGTGAACTGTATCAAAA40.10335917312661498No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)