FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OODve765.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OODve765.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10779
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT963489.37749327395862No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCGCTTTGTAT1221.1318304109843214No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCGCTTTGTAT900.8349568605622042No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT450.4174784302811021No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCGCTTTGTAT430.3989238333797198No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCGCTTTGTAT340.3154281473234994No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCGCTTTGTAT270.2504870581686613No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCCTTGTAT260.24120975971797012No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGCTTTGTAT240.22265516281658781No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCGCTTTGTAT240.22265516281658781No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCGCTTTGTAT230.21337786436589667No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAC170.1577140736617497No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCGCTTTGTAT170.1577140736617497No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCGCTTTGTATT160.14843677521105852No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCGCTTTGTAT150.13915947676036738No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT140.12988217830967622No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCGCTTTGTAT140.12988217830967622No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCGCTTTGTAT140.12988217830967622No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCGCTTTGTATTG130.12060487985898506No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT130.12060487985898506No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGCTTTGTAT120.11132758140829391No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCGCTTTGTAT120.11132758140829391No Hit
CGGAAGGTCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTATT110.10205028295760274No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCGCTTTGTAT110.10205028295760274No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)