FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi760.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi760.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4820
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC177936.90871369294606No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT108922.593360995850624No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTCAATA3056.327800829875518No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA2435.04149377593361No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTTCAAAT1823.775933609958506No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC310.6431535269709543No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC310.6431535269709543No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA280.5809128630705395No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAAAATGTACTGTC280.5809128630705395No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC270.5601659751037344No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT240.49792531120331945No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT210.43568464730290457No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT210.43568464730290457No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA200.4149377593360996No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC190.3941908713692946No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA180.37344398340248963No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC170.35269709543568467No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA160.33195020746887965No Hit
CGGAAGGATCATTACCACATCTCGAGCCCACGAGACAGCAGTGGATGTCT150.3112033195020747No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC150.3112033195020747No Hit
CGGAAGGATCATTACCACATCTCCAGCAGTGGATGTCTAGGCTCTGTCTC150.3112033195020747No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT140.29045643153526973No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTACATA140.29045643153526973No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC110.2282157676348548No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACA110.2282157676348548No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC110.2282157676348548No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC110.2282157676348548No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT90.18672199170124482No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC90.18672199170124482No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCACTTTGTA80.16597510373443983No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC80.16597510373443983No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT70.14522821576763487No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC70.14522821576763487No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC70.14522821576763487No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTGTGTAT70.14522821576763487No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC70.14522821576763487No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAATCGTTCAATA70.14522821576763487No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG70.14522821576763487No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAACA60.12448132780082986No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC60.12448132780082986No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTACATA60.12448132780082986No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCACTTTGTA60.12448132780082986No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT60.12448132780082986No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAATCGTTCAATA60.12448132780082986No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC60.12448132780082986No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT60.12448132780082986No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT50.1037344398340249No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAATCGTTCAAAT50.1037344398340249No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT50.1037344398340249No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC50.1037344398340249No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC50.1037344398340249No Hit
CGGAAGGATCATTACCACTCCTAAAAACTTTCCACGTGAACCGTATCAAC50.1037344398340249No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC50.1037344398340249No Hit
CGGAAGGATCATTACACACCTAAAAACTTTCCACGTGAACCGTATCAACA50.1037344398340249No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC50.1037344398340249No Hit
CGGAAGGATCATTACCAAACCAAAAACTATCCACGTGAACCACTTTGTAT50.1037344398340249No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT50.1037344398340249No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAGCGTATCAAC50.1037344398340249No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT50.1037344398340249No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC50.1037344398340249No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTACATA50.1037344398340249No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTCAAAT50.1037344398340249No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT50.1037344398340249No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)