FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi758.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi758.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences665
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT31146.766917293233085No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC345.112781954887218No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC334.962406015037594No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATCTC243.6090225563909777No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT121.8045112781954888No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC111.6541353383458646No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT111.6541353383458646No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT101.5037593984962405No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA101.5037593984962405No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT71.0526315789473684No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT71.0526315789473684No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC71.0526315789473684No Hit
CGGAAGGATCATTACCACGAGACACGACACCAGCAGTGGATGTCTAGGCT71.0526315789473684No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT60.9022556390977444No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC50.7518796992481203No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC50.7518796992481203No Hit
CGGAAGGATCATTACCACGGTGTATAAGAGACAGCAGTGGATGTCTAGGC50.7518796992481203No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT50.7518796992481203No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT40.6015037593984963No Hit
CGGAAGGATCATTACCAAGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.6015037593984963No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT30.4511278195488722No Hit
CGGAAGGATCATTACCACTCGTCGACAGCAGTGGATGTCTAGGCTCTGTC30.4511278195488722No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT30.4511278195488722No Hit
CGGAAGGATCATTACCACGAGACCGAGCCCACGAGACAGCAGTGGATGTC30.4511278195488722No Hit
CGGAAGGATCATTACCACGAGACAGCATTGGATGTCTAGGCTCTGTCTCT30.4511278195488722No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT30.4511278195488722No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT30.4511278195488722No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC30.4511278195488722No Hit
CGGAAGGATCATTACCACGAGACAGCGGAAGGATCATTACCACGAGACAG30.4511278195488722No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATTTCTAGGCTCTGTCTCT20.30075187969924816No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGAACGTAGCGAATCTC20.30075187969924816No Hit
CGGAAGGATCATTACCACATCGCCGGCAGCAGTGGATGTCTAGGCTCTGT20.30075187969924816No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.30075187969924816No Hit
CGGAAGGATCATTACCACAAGACCAGCAGTGGATGTCTAGGCTCTGTCTC20.30075187969924816No Hit
CGGAAGGATCATTACCACGAGACAGCAGGGGATGTCTAGGCTCTGTCTCT20.30075187969924816No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCTCCGAACCCACGAGA20.30075187969924816No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.30075187969924816No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.30075187969924816No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGCTCTT20.30075187969924816No Hit
CGGAAGGATCATTACCACTCCGAGCCCACGAGACCGTAGCGAATCTCGTA20.30075187969924816No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTTTCT20.30075187969924816No Hit
CGGAAGGATCATTACTACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGGAGGATCATTACCACGAGGCAGCAATGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTTCTC10.15037593984962408No Hit
CGGAAGGATCATTAACACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACCATCAGTGGATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTAACACGAGACAGCAGGGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGATGCAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTTCGTCGGCAGCAGTGGATGTCTAGGCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACTAGCTTGATAGTCAAGACACGACACCA10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGCCCACGAGACAGCAGTGGATGTCTAGGCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCCCTGT10.15037593984962408No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTATGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCGGAAGCAGTGGATATCTAGGCTCTGT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGTATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CGGAAGGAGCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGGTCTGTCTCT10.15037593984962408No Hit
CGGAATGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.15037593984962408No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTG10.15037593984962408No Hit
CTGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
GATGAGTCAGCGTCGAATAGCCGTTCACTATGTTGCGGTTACTCACTGTC10.15037593984962408No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGAGTCTAGGCTCTGTCTCTT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACTCGTCGGGAGCAGTGGATGTCTAGGCTCTGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCCCTGTCTCTTATA10.15037593984962408No Hit
CGGAAGGTCATTACCACGAGACCGAGCACACGAGACAGCAGTGGATGTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAATGGATGTCTAGGCTCTGT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGCTAGGCTCTGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGTTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACAACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
GAGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTTTCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGATCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACCGTCGTCAGCAGTGGATGTCTAGGCTCTGTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAATGGTCGTCTAGGACCTGTCTCT10.15037593984962408No Hit
CTGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTATGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTTT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGTATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CTTCCTTCTCCTTCCCCCTCTCCCTCCTTTGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGAGCATTACCACGAGACAGCAGTGGACGTCTAGGCTCTGTCAAC10.15037593984962408No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTAGATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACCACGAGACAGCAGTGGATGTCTAGGCT10.15037593984962408No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACGCATCTCCGAGCCCACGAGA10.15037593984962408No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGTCAGCAGTGGATGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGTGTATAAGAGACAGCAGTGGATGTCTAGGCT10.15037593984962408No Hit
CGGAAGGATCATTAGCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA10.15037593984962408No Hit
CTTCCTTCTCCTTCCCCCTTTTTCTCCTCTACAGCAGTGGATGTCTAGGC10.15037593984962408No Hit
CGGAGGATCATTAGCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCTT10.15037593984962408No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGTATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGCAGTGGATGTCTAGGCTCTGTCTCTTATACA10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAAGCAGTGGATGTCTAGGCTCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACTCGTCGGCATCAGTGGATGTCTAGGCTCTGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAAAAGAGACTAGCTTGATAGTCAAGACACGA10.15037593984962408No Hit
CGGAAGGATCATTACCACCGTCGGGAGCAGTGGATGTCTAGGCTCTGTCT10.15037593984962408No Hit
CGGAAGTATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTTGTCTCT10.15037593984962408No Hit
CGGAAGGATCAGTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACATCTCCGAGACCACGAGACCGTAGCGAATCTC10.15037593984962408No Hit
CGGAAGGATCATTATCACGAGAAAGCAGTGGATGTCTAGGCTCTGCTCTT10.15037593984962408No Hit
CGGAAGGATATTACAACCAGCAGTGGATGTATAGGCTCTGTCTCTTATAC10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCTTCAGCAGTGGATGTCTAGGCTCTGT10.15037593984962408No Hit
CGGAAGGATCATACCACTCGTCCGCAGCAGTGGATGTCTAGGCTCTGTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACTCGTCGTCGGCAGCAGTGGATGTCTAGGCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACATGTCGGAAGCGACAGAAGGGTATAAGAGACA10.15037593984962408No Hit
CGGAAGGATCATAACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA10.15037593984962408No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAAGCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCTCCGAGCCCACGAGA10.15037593984962408No Hit
CGGAAGGATCATTCCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCTT10.15037593984962408No Hit
CGGGAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCAAATCTCCGAGCCCACGAGACCGTAGCGAATCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCGGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTAACACGAGCCCACGAGACAGCAGTGGATGTCTAGGCT10.15037593984962408No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGATAAAGCAGTGGATGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCGTCAGCATTGGATGTCTAGGCTCTGT10.15037593984962408No Hit
CGGAAGGATCATTAACACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCGCTGT10.15037593984962408No Hit
CGGAAGGATCATTACCACTCGACGGCAGCAGTGGATGTCTAGGCTCTGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACATATCCGAGCCCACGAGACCGTAGCGAATCTC10.15037593984962408No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGAGCGGTC10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGCCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCAAGGTGTATAAGAGACAGCAGTGGATGTCTAGGC10.15037593984962408No Hit
CGGAAGGATCATTACCAAGAGGTAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACTCGTCAGCAGCAGTGGATGTCTAGGCTCTGTC10.15037593984962408No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
GATGAGTCAGCGTCGAACGCTATGTTGCGGTTACTCACTGTCTCTTATAC10.15037593984962408No Hit
CGGAAGGAGCATTACCACGAGACAGCAGTGGATGTCTAGGTTCTGTCCTT10.15037593984962408No Hit
CGGAAGGATCATTACCACGTCGTCGACAGCAGTGGATGTCTAGGCTCTGT10.15037593984962408No Hit
CGGAAGGATCATTACCACAAGACACAGCAGTGGATGTCTAGGCTCTGTCT10.15037593984962408No Hit
CGGAAGGATCATTACCACTCTTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.15037593984962408No Hit
CAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.15037593984962408No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)