FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi757.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi757.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences592
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT31653.37837837837838No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC254.222972972972973No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC183.040540540540541No Hit
CGGAAGGATCATTACCACGTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA183.040540540540541No Hit
CGGAAGGATCATTACCACGCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT81.3513513513513513No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC71.1824324324324325No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT71.1824324324324325No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT71.1824324324324325No Hit
CGGAAGGATCATTACCACAAGACCAGCAGTGGATGTCTAGGCTCTGTCTC50.8445945945945946No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT50.8445945945945946No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA50.8445945945945946No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT40.6756756756756757No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA40.6756756756756757No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.6756756756756757No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT40.6756756756756757No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT40.6756756756756757No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT30.5067567567567568No Hit
CGGAAGGATCATTACCACGAGACCACGAGACAGCAGTGGATGTCTAGGCT30.5067567567567568No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC30.5067567567567568No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATCTC30.5067567567567568No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC30.5067567567567568No Hit
CGGAAGGAGCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.33783783783783783No Hit
CGGAAGGATCATTACCACGTCAGCAGTGGATGTCTAGGCTTTGTCTCTTA20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT20.33783783783783783No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGAGAGCAGTGGATGTCTAGGCTCTGTCTCT20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGACAGCAGGGGATGTCTAGGCTCTGTCTCT20.33783783783783783No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC20.33783783783783783No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTCTCTT20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGACAGCAGTTGATGTCTAGGCTCTGTCTCT20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGACACGACACCAGCAGTGGATGTCTAGGCT20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGACAGCGGAAGGATCATTACCACGAGACAG20.33783783783783783No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA20.33783783783783783No Hit
CGGAAGGATCATTACCACGAGACAACAGGTGATGGCTAGGCCCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGATAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGGCACCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATTTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCGCTGTCTCT10.16891891891891891No Hit
CGGAAGGAGCATTACCACTCGTCTGCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACATCTCCGAACCCACGAGACAGCAGTGGATGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGTCAGCAGTGAATGTCTAGGCTCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGCGGATGACTAGTATAAGACACA10.16891891891891891No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCAGTGGATGTCTAAGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGTCAGCAGTGGATGTCTAGGCTCTGTCCTTAT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAAGTGGATGTCTAGGCTCTGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCGCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGTGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGAAGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCGAGGCA10.16891891891891891No Hit
CGGAAGGATAATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTTTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGGCACAGCAGTGGATGTCTAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCATCGGCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCATTGGATGTCTATGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGAACATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTCCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCTTCTGCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGTTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACAACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAAGGATCCTTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAACCAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACCGTCGCCAGCAGTGGATGTCTAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCGTTGGCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CCGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA10.16891891891891891No Hit
CGGAAGGAGCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGGCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGTATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACGACACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTTT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGAATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCGTCGCAGCGTCGGATGTGTATAAGAGACAG10.16891891891891891No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCCAGGTTCTGTCTCTTATA10.16891891891891891No Hit
CGGAAGGATCATTACCAAGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAACAATGGAAGGTCAGGGACTGGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACATATCCGAACCCACGAGACAGCAGTGGATGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCCTGTCTC10.16891891891891891No Hit
CTTCCTTCTCCTTCCCACGAGACAGGAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTAACACGTCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCTTTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.16891891891891891No Hit
CGGAAGGTCATACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCATTCCACGAGACAGCAGTGGATGTCTAGGCTCGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGTTGTTTACTCGCCTCCTC10.16891891891891891No Hit
CGGAAGGATCATTACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGAACATTAAAAAGAGAAAGAAGGGGAGGGATAGGCTATGTCTCT10.16891891891891891No Hit
CGGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAAGCAGTGGATGTCTAGGCTCTGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTTTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCCCTGTCTC10.16891891891891891No Hit
TGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGTGTCTAGGCTCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGCCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGGTCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTATTCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACATCTCCGAACCCACGAGAAAGCAGTGGATGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACTTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.16891891891891891No Hit
CGGAAGGATCATTAACACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCACATCGTCGACAGCAGTGGATGTCTAGGCTCTGT10.16891891891891891No Hit
CGGAAGGATCATTACCACAAGACACCAGCAGTGGATGTCAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTGACCTGCCGCAGCAGTGGATGTCTAGGCTCT10.16891891891891891No Hit
CGGCCCGGGATGTACATTGGCGACACCGACGACGGCTCCGGCCTCCACCA10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGGCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCTTCGGCAGCAGTGGATGTCTATGCTCTGCC10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAACAGTGGATGTCTAGGCTCTGCCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACATCTCCGAACCCATGAGACAGCAGTGGATGTC10.16891891891891891No Hit
CGGAAGGAGCATTACCACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACGCAGCAGTGGATGTCTAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACATCCCCGAGCCCACGAGACCGTAGCGAATCTC10.16891891891891891No Hit
CGGAAGGATCATAACCACTCGTCGGCAGCGTCAGATGTGTATAAGAGACA10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCGTCTCTT10.16891891891891891No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.16891891891891891No Hit
CGGAAGGATCATTACCACCGTCTGCAGCAGTGGATGTCTAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTGGATGTCTAGGCACTGTCTC10.16891891891891891No Hit
CGGAAGGATCATTACCACCAGCAGTGGAGTCTAGGCTCTGTCTCTTATAC10.16891891891891891No Hit
CAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACTAGCAGTGGATGTCTAGGCTCTGTCTC10.16891891891891891No Hit
CGTCCTGCGATGTAAATAGGCGACACCGACGACGGCTCGGGCCTCCACCA10.16891891891891891No Hit
CGGAAGTCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGTCATTACCACTATACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16891891891891891No Hit
CAGTGGCTGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA10.16891891891891891No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTGGT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTAGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGAAGTCTAGGCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTAGCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC10.16891891891891891No Hit
CGGAAGGATCATTACCATGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGAGCGGCC10.16891891891891891No Hit
CGGAAGGATCATTAGCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.16891891891891891No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCAGCTCTGTCTCC10.16891891891891891No Hit
CGGAAGGATCATTACCACGCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.16891891891891891No Hit
CGGAAGGATCATTACCACCCGTCGGCAGCGTCAGATGTGTATCAGAGAGA10.16891891891891891No Hit
CGGAAGGATCATTACCACGTCTCCGAGCCCACGAGACCGTAGCGAATCTC10.16891891891891891No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)