FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi755.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi755.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences509
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT23345.77603143418468No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC418.055009823182711No Hit
CGGAAGGATCATTACCACGAGACACAGCAGTGGATGTCTAGGCTCTGTCT173.3398821218074657No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT173.3398821218074657No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC132.5540275049115913No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA122.357563850687623No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC101.9646365422396856No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGCAGTGGATGTCTAGGCTC81.5717092337917484No Hit
CGGAAGGATCATTACCACATCTCCGAGCCAGCAGTGGATGTCTAGGCTCT81.5717092337917484No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTCTCTT81.5717092337917484No Hit
CGGAAGGATCATTACCACGTCGTCAGCAGTGGATGTCTAGGCTCTGTCTC71.37524557956778No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT71.37524557956778No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT71.37524557956778No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACAGCAGTGGATGTC61.1787819253438114No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCGTAGCGAATCTC61.1787819253438114No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT40.7858546168958742No Hit
CGGAAGGATCATTACCACGAGACCACGAGACAGCAGTGGATGTCTAGGCT30.5893909626719057No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT30.5893909626719057No Hit
CGGAAGGATCATTACCACTCGTCGCAGCAGTGGATGTCTAGGCTCTGTCT30.5893909626719057No Hit
CGGAAGGATCATTACCACTCCGAGCCCACGAGACAGCAGTGGATGTCTAG30.5893909626719057No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTTCTCTT30.5893909626719057No Hit
CGGAAGGATCATTACTACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.3929273084479371No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT20.3929273084479371No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA20.3929273084479371No Hit
CGGAAGGATCATTACCACGATACAGCAGTGGATGTCTAGGCTCTGTCTCT20.3929273084479371No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCCTGTCTC20.3929273084479371No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC20.3929273084479371No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAA20.3929273084479371No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC20.3929273084479371No Hit
CGGAAGGATTATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGTGTCTAGGCTCTGTCTCTT10.19646365422396855No Hit
CGGAAGGATCATTACCACCGTCGGAAGCAGTGGATGTCTAGGCTCTGTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACTCAGCAGTGGATGTCTAGGCTCTGTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGAAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTATCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTTC10.19646365422396855No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTTTAGGCTCTGT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGTCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.19646365422396855No Hit
CGGAAGGATATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.19646365422396855No Hit
CGGAAGGATCATTACCACATCATCAGTGGATTTCTAGGCTCTGTCTCTTA10.19646365422396855No Hit
CGGAAGGATCATTACCACATCTCCGAGCACGAGACAGCAGTGGATGTCTA10.19646365422396855No Hit
CGGAAGGATCATTACCACATCTCCGCGCCCACGGGACAGCAGTGGATGTC10.19646365422396855No Hit
CGGAATGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACATCTGACGCTGCGACAGCAGTGGATGTCTAGG10.19646365422396855No Hit
CGGAAGGAACATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTCTCTTA10.19646365422396855No Hit
CAGTGGATGTCTAGGCTCTGTCTCTCATACACATCTCCGAGCCCACGAGA10.19646365422396855No Hit
CGGAAGGATTATTACCACGAGACCAGCAGTGGAGGTATAGGCTCTGTCTC10.19646365422396855No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTTTAGGCTCTGTC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTTGGATGTCTAGGCTCTGTCTC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGGCAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCCGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACATCTCCTAGCCCACGAGGCAGCAGTGGATGTC10.19646365422396855No Hit
CGGAAGGATCATTACCACATTTCCGAGCCCACGAGACAGCAGTGGATGTC10.19646365422396855No Hit
CGGAAGGATCATTTCCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTTT10.19646365422396855No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGAAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.19646365422396855No Hit
CGGAAGGATCATTACCACTTCGTCAGCAGTGGATGTCTAGGCTCTGTCTC10.19646365422396855No Hit
CGGAAGGATCATTAACACATCTCCGAGCCCAGCAGTGGATGTCTAGGCTC10.19646365422396855No Hit
CGGAAGGATCATTACCACATCTCCGAGCAGCAGTGGATGTCTAGGCTCTG10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAAGAGGGGGATGCTAAGGCCTGGCCCC10.19646365422396855No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.19646365422396855No Hit
CGGAAGGATCATTACCACGTCGGCAGCGTCAGATGTGTATAAGAGACAGC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGGCCAGCAGTGGATGTCTAGGCTCTGTCTC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATTGTCTAGGCTCTGTCTC10.19646365422396855No Hit
CGGAAGGATCATACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACAAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACACTCCGAGACGAGCAGCAGTGGATGTCTAGGC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGTAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTAACACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC10.19646365422396855No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCGGTCTCTTA10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAACAGTGGATGTCTAGGCCCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCAGGCTCTGTCTCTTATA10.19646365422396855No Hit
GATGAGTCAGCGTCGAACACCGTGCGTTGCACTATGTTGCGGTTACTCAC10.19646365422396855No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.19646365422396855No Hit
GATGAGTCAGCGTCGAACATGTAACATTTATTGCATGATACGTGGCATTT10.19646365422396855No Hit
CGGAAGGATCATTACCAAGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACATCATCAGTGGATGTCTAGGCTCTGTCTCTTA10.19646365422396855No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTCTCTA10.19646365422396855No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTTGATGTCTAGGCTCGTCTC10.19646365422396855No Hit
CGGAAGATCATTACCACGGACAGCAGTGGATGGCTAGGCTCTGTCTCTTA10.19646365422396855No Hit
CGGAAGGATCATTACCACTCGTCGCAGCGTAAGATGTGTATAAGAGGCAG10.19646365422396855No Hit
CGGAAGGGGATCATTACCACGATACAGCAGTGGATGTCTAGGCTCTGTCT10.19646365422396855No Hit
TGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTAGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACATATCCGAGCCCACGAGACCGTAGCGAATCTC10.19646365422396855No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTATGTCTCT10.19646365422396855No Hit
CGGAAGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.19646365422396855No Hit
CGGAAGGATCATTATCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGTATCATTACCACGAACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.19646365422396855No Hit
CGGAAGGATCATTACCACATCTCCTAGCCCACGAGACAGCAGTGGATGTC10.19646365422396855No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGGTCTAGGCTCTGT10.19646365422396855No Hit
CGGAAGGATCATTACCCCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGGACAGCAGTGGATGTCTAGGCTCTGTTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACTCGTCGCAGCGTCAGATGTGTATAAAAGACAG10.19646365422396855No Hit
CGGAAGGATCATTACCGCGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTAGCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
AGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.19646365422396855No Hit
CGGAAGGATCATTACCACGTCTCCGAGCCCACGAGACCGTAGCGAATCTC10.19646365422396855No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)