FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi754.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi754.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2947
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA88930.16627078384798No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTGTAAT38513.064133016627078No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC37212.623006447234475No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA2157.2955548014930445No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA1645.564981336952833No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA1003.39328130302002No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA521.7645062775704106No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT511.7305734645402102No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA361.2215812690872072No Hit
CGGAAGGATCATTACCACACCTAAACAACTTTCCACGTGAACCGTATCAA311.0519172039362061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA210.7125890736342043No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAA200.6786562606040041No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA180.6107906345436036No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA180.6107906345436036No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA170.5768578215134035No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA160.5429250084832032No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAT150.508992195453003No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA120.40719375636240246No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA120.40719375636240246No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA100.33932813030200204No Hit
CGGAAGGATCATTACCACACCCAGAAACTTTCCACGTGAACCGTTGTAAT80.2714625042416016No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA60.20359687818120123No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA60.20359687818120123No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC60.20359687818120123No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA50.16966406515100102No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA50.16966406515100102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTTAATA50.16966406515100102No Hit
CGGAAGGATCATTACCACACACAAAAACTTTCCACGTGAACCGTTGTAAT50.16966406515100102No Hit
CGGAAGGATCATTACCACCCAAAAACTTTCCACGTGAACCGTTGTAATTA50.16966406515100102No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA50.16966406515100102No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT50.16966406515100102No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA50.16966406515100102No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC50.16966406515100102No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA40.1357312521208008No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA40.1357312521208008No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA40.1357312521208008No Hit
CGGAAGGATCATTACCACACATAAAAACTTTTCACGTGAACCGTATCAAA40.1357312521208008No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAAACGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCATATTCA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGCATTCA30.10179843909060061No Hit
CGGAAGGATCATTACCACGCCCAAAAACTTTCCACGTGAACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGGACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATTCAA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAGCCGTATCAAA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCCAAAGACTTTCCACGTGAACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC30.10179843909060061No Hit
CGGAAGGATCATTAACACACCCAAAAACTTTCCACGTGAACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGCGAACCGTTGTA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATTCAA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCCAAGAACTTTCCACGTGAACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCCAAAAACTCTCCACGTGAACCGTTGTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTTTTAAT30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC30.10179843909060061No Hit
CGGAAGGTCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10179843909060061No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA30.10179843909060061No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10179843909060061No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)