FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi752.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi752.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences541
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC23242.883548983364136No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC9016.635859519408502No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT6612.199630314232902No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACTGTCTTAGCA315.730129390018484No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA142.5878003696857674No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT61.1090573012939002No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAAACGTATCAAC40.7393715341959335No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA40.7393715341959335No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC40.7393715341959335No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC30.5545286506469501No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC30.5545286506469501No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC30.5545286506469501No Hit
CGGAAGGATCATTACCACACATAAAAACTATCCACGTGAACCGTATCAAC30.5545286506469501No Hit
CGGAAGGATCATTACCACACCAAAAACTTCCCACGTGAACTGTCTTAGCA20.36968576709796674No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACTGTCGTTAT20.36968576709796674No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGCTAT20.36968576709796674No Hit
CGGAAGGATCATTAACACACCTAAAAACTATCCACGTGAACCGTATCAAC20.36968576709796674No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.36968576709796674No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC20.36968576709796674No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA20.36968576709796674No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC20.36968576709796674No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTACATA10.18484288354898337No Hit
CGGAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.18484288354898337No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAAACGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACATGAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACAAAAAACTTTCCACGTGAACTGTCTTAGCATG10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAGCCGTATCAAC10.18484288354898337No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACTGTTTTAGCA10.18484288354898337No Hit
CGGAAGGATCATTACCACACTAAAAACTTTCCACGTGAGCTGTCTTAGCA10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATAAACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTAACACACATAAAAACTTTCCACGTGAACCGTATCAAA10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAATGTCGTTAT10.18484288354898337No Hit
CGGAAGGATCATTACCACACCAAGAACTTTCCACGTGAACTGTCTTAGCA10.18484288354898337No Hit
CGGAAGGATCATTACCACTCCTAAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACAAAAAACTTTCCACGTGAACTGTCTTAGCA10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC10.18484288354898337No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTCGTTAT10.18484288354898337No Hit
CGGAAGGATCATTACCACACATAAAAGCTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCAACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATAAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAGC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTGTCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATAAAC10.18484288354898337No Hit
CGGAAGGATCATTAACACACATAAAAACTATCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTAACACACCTAGAAACTATCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACAACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
TGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA10.18484288354898337No Hit
CGGAAGGATCATTACCACCTAAAAACTATCCACGTGAACCGTATCAACCC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACTTGAACCGTATCAAC10.18484288354898337No Hit
GATTAGTCATCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTACCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACTGTCGTTAC10.18484288354898337No Hit
CGGAAGGGTCATTACCACACCTAAAAACTTTCCACATGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTACATA10.18484288354898337No Hit
CGGAAGGATCTTTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACTGTCGTTATT10.18484288354898337No Hit
CGGAAGGATCACTACCACACCAAAAACTTTCCACGTGAACTGTCTTAGCA10.18484288354898337No Hit
CTTCCTTCTCCTTCCCCCCCCTCCCCCCTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTACATA10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAGATTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTGTCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACTGTCGTTAT10.18484288354898337No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAACC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACATGAACTGTCGTTAT10.18484288354898337No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAACA10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAATATCGTTAT10.18484288354898337No Hit
CGGAAGGATCGTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGGACCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTAACAAC10.18484288354898337No Hit
CTGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTTTAT10.18484288354898337No Hit
CGGAAGGATCATTACCACACTTAAAAACTTTCCACGTGAACCGTATCAAC10.18484288354898337No Hit
CGGAAGGTCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAATCGTATCAAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCCAC10.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAACTAACCACGTGAACCGTATCAAC10.18484288354898337No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)