FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi751.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi751.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4680
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA153132.71367521367522No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA111123.73931623931624No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA57512.286324786324785No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC1873.9957264957264953No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC801.7094017094017095No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA621.3247863247863247No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA430.9188034188034189No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA300.641025641025641No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA290.6196581196581197No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA280.5982905982905984No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATCAAA240.5128205128205128No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC220.4700854700854701No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC220.4700854700854701No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA190.40598290598290604No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA180.38461538461538464No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA160.3418803418803419No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAAATGTATCAAA150.3205128205128205No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA140.2991452991452992No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA140.2991452991452992No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA130.2777777777777778No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATCAAAAC130.2777777777777778No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCACGTGAACTGTATCAAA130.2777777777777778No Hit
CGGAAGGATCATTACCACCCTAAAAAACTTCCACGTGAACTGTATCAACA110.23504273504273504No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA110.23504273504273504No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA110.23504273504273504No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA110.23504273504273504No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAA100.2136752136752137No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATAAAA100.2136752136752137No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC90.19230769230769232No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA90.19230769230769232No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATCAAA90.19230769230769232No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTGTCAAA90.19230769230769232No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATCAAA80.17094017094017094No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA80.17094017094017094No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA80.17094017094017094No Hit
CGGAAGGATCATTACCACACTTAAAAAACTTCCACGTGAACTGTATCAAA70.1495726495726496No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAACTGTATCAAA70.1495726495726496No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAGA70.1495726495726496No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA70.1495726495726496No Hit
CGGAAGGATCATTACCACACATAAAAACTTTTCACGTGAACCGTATCAAC70.1495726495726496No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAG70.1495726495726496No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA70.1495726495726496No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATCAAA60.1282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATCAAA60.1282051282051282No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC60.1282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA60.1282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAA60.1282051282051282No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA60.1282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG60.1282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCGAA60.1282051282051282No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA50.10683760683760685No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA50.10683760683760685No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTCCACGTGAACTGTATCAAA50.10683760683760685No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATCAAA50.10683760683760685No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTCCACGTGAACTGTATCAAA50.10683760683760685No Hit
CGGAAGGATCATTACCACATCTAAAAAACTTTCCACGTGAACCGTATTCA50.10683760683760685No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA50.10683760683760685No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTCCACGTGAACTGTATCAAA50.10683760683760685No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)