FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi750.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi750.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2512
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC83333.160828025477706No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG50620.14331210191083No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA29111.584394904458598No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA26410.509554140127388No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGAAA411.6321656050955413No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC250.9952229299363057No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA200.7961783439490446No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA160.6369426751592357No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTACCACGTGAATCTGTACTG120.47770700636942676No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCCGTACTG120.47770700636942676No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC120.47770700636942676No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA100.3980891719745223No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC100.3980891719745223No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTATAA90.3582802547770701No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAATCTGTACTGT80.3184713375796179No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTG80.3184713375796179No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATGAAC80.3184713375796179No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC80.3184713375796179No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC70.2786624203821656No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC70.2786624203821656No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCTGTACTGT60.23885350318471338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC60.23885350318471338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATTAAA60.23885350318471338No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAA60.23885350318471338No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA50.19904458598726116No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATTAAA50.19904458598726116No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC50.19904458598726116No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA50.19904458598726116No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATTAAA50.19904458598726116No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC50.19904458598726116No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTGT50.19904458598726116No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGCGAATCTGTACTG40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC40.15923566878980894No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACTACGTGAATCTGTACTG40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA40.15923566878980894No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC40.15923566878980894No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC40.15923566878980894No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATTAAA40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA40.15923566878980894No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATTAAA40.15923566878980894No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC30.11942675159235669No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA30.11942675159235669No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATTAAA30.11942675159235669No Hit
CAGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTGTT30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGAAA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAAAA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACTAAA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATTAAAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTG30.11942675159235669No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.11942675159235669No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC30.11942675159235669No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTATCAAC30.11942675159235669No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.11942675159235669No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)