FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi749.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi749.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences491
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10120.570264765784113No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT8817.922606924643585No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC367.3319755600814664No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC255.091649694501019No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT214.276985743380855No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT193.8696537678207736No Hit
CGGAAGGATCATTACCACATCTCAGCAGTGGATGTCTAGGCTCTGTCTCT173.462321792260693No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC173.462321792260693No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT132.6476578411405294No Hit
CGGAAGGATCATTACCACGAGACCCAGCAGTGGATGTCTAGGCTCTGTCT132.6476578411405294No Hit
CGGAAGGATCATTACCACATCTCCCAGCAGTGGATGTCTAGGCTCTGTCT112.240325865580448No Hit
CGGAAGGATCATTACCACATCTCCGCAGCAGTGGATGTCTAGGCTCTGTC91.8329938900203666No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT91.8329938900203666No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC81.6293279022403258No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT61.2219959266802443No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.6109979633401221No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAGTCTGTACTT30.6109979633401221No Hit
CGGAAGGAGCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC30.6109979633401221No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTT20.40733197556008144No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC20.40733197556008144No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTT20.40733197556008144No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA20.40733197556008144No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCATGTGAACCGTATCAAA20.40733197556008144No Hit
CTGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAA10.20366598778004072No Hit
CGGAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGCACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAGAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGATCATTAACACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGAGCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCATGTGAACCGTATCAAC10.20366598778004072No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTTGATGTCTAGGTTCTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACAACGTGAATCTGTACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCAGTGTATGTCTAGGCTCTGTCTCTTATAC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGACTCTGTACTTT10.20366598778004072No Hit
CGAAGGCTCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
GATGAGTCAGCGTCGAATAGCCGTTCACTATGTTGCGGTTACTCACTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACACAGCAGTGGATGTCTAG10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTGCTTT10.20366598778004072No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTACCACGTGAATCTGTACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAGAAACTATCCACGTGAACCACTTTGTA10.20366598778004072No Hit
CGGAAGGATCATACCACACCAAAAAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCAGTTGATGTCTAGGCTCTGTCTCTTATAC10.20366598778004072No Hit
CGGAAGGATCATTACCACCAAAAAACTTACCACGTGAATCTGTACTTTCC10.20366598778004072No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCATAACAAGGTTTCCGTAGGTG10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGAATCTGTACTT10.20366598778004072No Hit
GATGAGTCAGCGACGAATAGCCGTTCACTATGTTGCGGTTACTCACTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.20366598778004072No Hit
CGGAAGGATCATTACCACGAGGCCCAGCAGTGGATGTCTAGGCTCTGTCT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATATGTACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTAGGCTCTGTCTCTTATACAC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTGCCACGTGAATCTGTACTT10.20366598778004072No Hit
CCGAAGGATCATTACCACACCTCCCAGCAGTGGATGTCTAGGCTCTGTCT10.20366598778004072No Hit
CGGAAGGATCATTACCACATCTCCGCAGCAGTGGATGTCTAGGCTCTTTC10.20366598778004072No Hit
CTGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTTTC10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCATTGGATGTCTAGGCTCTGTCTCTTATAC10.20366598778004072No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.20366598778004072No Hit
CGGAAGGATCATTACCACATCTCCACAGCAGTGGATGTCTAGGCTCTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCCCTGTCTCTTATAT10.20366598778004072No Hit
CGGAAGGATCATTACCAAATCTCAGCAGTGGATGTCTAGGCTCTGTCTCT10.20366598778004072No Hit
CGGAAGGATCATTACCACCCCTAAAAACTTTCCACGTGAACCGTATCAAC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCGCGTGAATCTGTACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTCCCAGCAGTGAATGTCTAGGCTCTGTAT10.20366598778004072No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC10.20366598778004072No Hit
CGGAAGGATCATTACCACTTGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.20366598778004072No Hit
CTTCCTTCTCTTTCACCCCCCTACACACTTTCTACGTGAACCGTTTCAAA10.20366598778004072No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTACCACGTGAATCTGTACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA10.20366598778004072No Hit
CGGAAGGATCATTAACACATCTCCCAGCAGTGGATGTCTAGGCTCTGTCT10.20366598778004072No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.20366598778004072No Hit
CGGCCGGCGCCTTCCCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.20366598778004072No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTTCTAGGCTCTGT10.20366598778004072No Hit
CGGAAGGATCATTACCACATCTCAGCAGGGGATGTCTAGGCTCTGTCTCT10.20366598778004072No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTCCGCAGCAGTGGATGTCTAGGCTCTGTC10.20366598778004072No Hit
CGGAAGGATCATTACCACACCGAAAAAACTTACCACGTGAATCTGTACTT10.20366598778004072No Hit
CTTCCTTCTCCTTCCCCCCCCCCCCCCCCTTACCACGTGAATCTGTACTT10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAA10.20366598778004072No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTTTAGGCTCTGTCTCTT10.20366598778004072No Hit
CGGAAGGATCATTACCACATCAAGCAGTGGATGTCTAGGCTCTGTCTCTT10.20366598778004072No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC10.20366598778004072No Hit
CGGAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA10.20366598778004072No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA10.20366598778004072No Hit
CGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTTT10.20366598778004072No Hit
CGGAAGGATCATTACCACATACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.20366598778004072No Hit
CGGAAGGATCATTACCACTCGACGGCAGCAGTGGATGTCTAGGCTCTGTC10.20366598778004072No Hit
CGGAAGGAGCGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGT10.20366598778004072No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAA10.20366598778004072No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTTTGTCTCTG10.20366598778004072No Hit
CGGAAGGATCATTAGCACATCTCCCAGCAGTGGATGTCTAGGCTCTGTCT10.20366598778004072No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCTTATACA10.20366598778004072No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCACGTGAACCGTTACATAC10.20366598778004072No Hit
CGGAAGGATCATTACCAAGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.20366598778004072No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)