FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi748.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi748.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences364
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20656.59340659340659No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA195.21978021978022No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC164.395604395604396No Hit
CGGAAGGATCATTACCACGGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA113.021978021978022No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC113.021978021978022No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA92.4725274725274726No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC71.9230769230769231No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA61.6483516483516485No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA41.098901098901099No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA30.8241758241758242No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.8241758241758242No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA20.5494505494505495No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA20.5494505494505495No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA20.5494505494505495No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.5494505494505495No Hit
CGGAAGGATCATTACCACCGTGGCAGCAGTGGATGTCTAGGCTCTGTCTC20.5494505494505495No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCTACGTGAACCGTATTCA20.5494505494505495No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA10.27472527472527475No Hit
CTTCCTTCTCCTTCCCCCCCCTCCCCCCCTTTCCCCTTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATACA10.27472527472527475No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CTTCCTTCTCCTTCCCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.27472527472527475No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA10.27472527472527475No Hit
CGGAAGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA10.27472527472527475No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
AGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACAGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTAATCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA10.27472527472527475No Hit
CGGAAGGGTCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACATGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA10.27472527472527475No Hit
CGGAAGGATCATTACCACAGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.27472527472527475No Hit
CGGAAGGATCATTACCACGGCAGCAGCGGATGTCTAGGCTCTGTCTCTTA10.27472527472527475No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGCGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGTCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA10.27472527472527475No Hit
CGGAAGGATCATTACCACTAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.27472527472527475No Hit
CGGAAGGATCATTACCACGGAAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.27472527472527475No Hit
CGGAAGGATCATTACTACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
GGCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTG10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC10.27472527472527475No Hit
GGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAACAACTTTCCACGTGAACCGTATCAAC10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA10.27472527472527475No Hit
CGGAAGGATCATACCACGGCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.27472527472527475No Hit
CGGAAGGATCATTCCCACACCTAAAAAACTTCCAACGTGAACCGTATTCA10.27472527472527475No Hit
TGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAAGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGAACATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATTCAA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA10.27472527472527475No Hit
GATAAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.27472527472527475No Hit
CAGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATCAAA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGCACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCCCACGTGAACTGTATCTAA10.27472527472527475No Hit
CGGAAGGATCATTACCACTCCTAAATAACTTTCCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGATCCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCACGGCAACAGTGGATGTCTAGGCTCTGTCTCTTA10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTTCACGTGAACCGTATTCA10.27472527472527475No Hit
CGGAAGGATCATTACCAAGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.27472527472527475No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTAA10.27472527472527475No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)