FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi744.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi744.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1446
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC48733.67911479944675No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT27318.87966804979253No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA20013.831258644536653No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC352.4204702627939145No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT211.4522821576763485No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC201.3831258644536653No Hit
CGGAAGGATCATTACCACACTACAGCAGTGGATGTCTAGGCTCTGTCTCT191.313969571230982No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTT171.1756569847856155No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC171.1756569847856155No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.8298755186721992No Hit
CGGAAGGATCATTACCACGTCGGCAGCAGTGGATGTCTAGGCTCTGTCTC120.8298755186721992No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC120.8298755186721992No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA100.6915629322268326No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC70.48409405255878285No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC70.48409405255878285No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACTGTCGTTAT60.4149377593360996No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG60.4149377593360996No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCG60.4149377593360996No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT60.4149377593360996No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA50.3457814661134163No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACTGTCGTTAT40.2766251728907331No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC40.2766251728907331No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACTGTCGTTAT40.2766251728907331No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAGCAGTGGATGTCTAGGC40.2766251728907331No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA40.2766251728907331No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC40.2766251728907331No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACTGTCGTTATTT40.2766251728907331No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA40.2766251728907331No Hit
CGGAAGGATCATTACCACACCAAAAAACTGTCCACGTGAACCGTTAAACA30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC30.2074688796680498No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACTGTCGTTAT30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAACC30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTAAACA30.2074688796680498No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTTTAT30.2074688796680498No Hit
CGGAAGGATCATTACCACTGTCTCTTATACACATCTGCAGCAGTGGATGT30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCTGTCGTTAT30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC30.2074688796680498No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC30.2074688796680498No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCGTTAT20.13831258644536654No Hit
CGGAAGGATCATTAACACATCTCCGAGCCCACGAGACCAGCAGTGGATGT20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACTGTCGTTAT20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACATGAACTGTCGTTAT20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAATGTCGTTAT20.13831258644536654No Hit
CGGAAGAATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.13831258644536654No Hit
CGGAAGGATCATTACCACGAGCAGCAGTGGATGTCTAGGCTCTGTCTCTA20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC20.13831258644536654No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAACA20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACTGTCGTTAT20.13831258644536654No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA20.13831258644536654No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA20.13831258644536654No Hit
CGGAAGGATCATTACCACTGTCTCTTATACAACAGCAGTGGATGTCTAGG20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACTGTCGTTATT20.13831258644536654No Hit
CTGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTAAACCGTATCAAC20.13831258644536654No Hit
CTGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACTGTCGTTAT20.13831258644536654No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA20.13831258644536654No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTAAACA20.13831258644536654No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAACA20.13831258644536654No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCACGTGAACTGTCGTTAT20.13831258644536654No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)