FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi742.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi742.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences373
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT16644.50402144772118No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT7419.839142091152816No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA4712.600536193029491No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC133.485254691689008No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT41.0723860589812333No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT20.5361930294906166No Hit
CGGAAGGATCATTAACACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT20.5361930294906166No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT20.5361930294906166No Hit
CGGAAGGATCATTACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATACAC20.5361930294906166No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG20.5361930294906166No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT20.5361930294906166No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT20.5361930294906166No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT20.5361930294906166No Hit
CGGAAGGATCATTAACACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA20.5361930294906166No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAAGCTCTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT10.2680965147453083No Hit
CGGAAGAATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
AGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACAACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCCCTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTACCACGACAGCAGTGGAAGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATT10.2680965147453083No Hit
CGGAAGGATCATTAACACGACACAGCAGTGGATGTCTAGGCTCTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTCCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.2680965147453083No Hit
CGGAAGGATCATAACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT10.2680965147453083No Hit
CGGAGGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTTGTCTCTTATACA10.2680965147453083No Hit
CGGAAGGATCATTACCCCGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGTAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAGCCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT10.2680965147453083No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCAGGCTCTGTCTCTT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTACCACGACGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCCCT10.2680965147453083No Hit
CGGAAGGATCATTACCCACCAAAAACTATCCACGTGAACCACTTTGTATT10.2680965147453083No Hit
CGGAAGGATCATTACCACGACAGCAGTGGAATTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT10.2680965147453083No Hit
GATGAGTCAGCATCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTATAT10.2680965147453083No Hit
CGGAGGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.2680965147453083No Hit
CGGAAGGATCATTACCACGACGGCAGTGGATGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCATTAACACGACAGCAGTGGATGTCTAGGCTATGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCATTACCACGGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CTTCCTTCTCCTTCCCCCCCCCCCCCCTCTCCACTTGAACCACTTTGTAT10.2680965147453083No Hit
CAGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTAACACGACAGCAGTGGAAGTCTAGGCTCTGTCTCTTA10.2680965147453083No Hit
CGGAAGGATCTTACCACGACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTGGTAT10.2680965147453083No Hit
CGGGAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC10.2680965147453083No Hit
CGGAAGGATCATTACCACGACAGCAGTGGATGTCTAGGCTCGTCTCTTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACAGCAGTAGATGTCTAGGCTCTGTCTCTTATAC10.2680965147453083No Hit
CGGAAGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.2680965147453083No Hit
CGGAAGGATCATACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATACA10.2680965147453083No Hit
CGGAATGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTTTGTCTCT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAACCTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.2680965147453083No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT10.2680965147453083No Hit
CGGAAGGATTATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.2680965147453083No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCATGTGAACCACTTTGTAT10.2680965147453083No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)