FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi739.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi739.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences985
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA22022.33502538071066No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA14014.213197969543149No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC12512.690355329949238No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA606.091370558375635No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC515.177664974619289No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC323.248730964467005No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC272.7411167512690358No Hit
CGGAAGGATCATTACCACATCTGCAGCAGTGGATGTCTAGGCTCTGTCTC262.6395939086294415No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA212.131979695431472No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTGCTCGTAATCTC181.8274111675126905No Hit
CGGAAGGATCATTACCACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC161.6243654822335025No Hit
CGGAAGGATCATTACCACATTCCGGCCCACGAGACCAGCAGTGGATGTCT131.3197969543147208No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCAGACAGCAGTGGATGTCTAG131.3197969543147208No Hit
CGGAAGGATCATTACCACATCTCCGGCCCACGAGACCAGCAGTGGATGTC111.116751269035533No Hit
CGGAAGGATCATTACCACCGCAACAGCAGTGGATGTCTAGGCTCTGTCTC111.116751269035533No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA90.9137055837563453No Hit
CAGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.6091370558375634No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATGT60.6091370558375634No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATCAAAAC50.5076142131979695No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA40.40609137055837563No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATCAAA40.40609137055837563No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACTGTATCAAA30.3045685279187817No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAC30.3045685279187817No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTACCAAA20.20304568527918782No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC20.20304568527918782No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCATACAGCAGTGGATGTCTAG20.20304568527918782No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCCCACGTGAACTGTATCAAA20.20304568527918782No Hit
CGGAAGGATCATTACCACAGCAGTTGATGTCTAGGCTCTGTCTCTTATAC20.20304568527918782No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA20.20304568527918782No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC20.20304568527918782No Hit
CGGAAGGATCATTACCACATCTAAAAAACTTCCACGTGAACTGTATCAAA20.20304568527918782No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATCAAA20.20304568527918782No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAGCCGTATCAAA20.20304568527918782No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.20304568527918782No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC20.20304568527918782No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA20.20304568527918782No Hit
CGGAAGGATCATTACCACATCTGCAGCAGTGTATGTCTAGGCTCTGTCTC20.20304568527918782No Hit
CGGAAGGATCATTACCACATTCCGGCCCGCGAGACCAGCAGTGGATGTCT10.10152284263959391No Hit
CGGAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACATATGCAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCACATTTGCAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCATCTGCAGCAGTGGATGTCTAGGCTCTGTCTCTT10.10152284263959391No Hit
CGGAAGGATCATTAACACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.10152284263959391No Hit
CGGAAGGATCATTACCACGAGACCATCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCTCACGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTGTCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGATCCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCGGCCCAAGAGACCAGCAGTGGATGTC10.10152284263959391No Hit
CGGAAGTATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.10152284263959391No Hit
CGGAAGGATCATTATCACCGCAACAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGGATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTATAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCACTCGTCGGCAGTTTCAGATGTGTATAAGAGACA10.10152284263959391No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAAACGTATCAAA10.10152284263959391No Hit
CGGAAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACTACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTGAGCTGCCGACCAGCAGTGGATGTCTAG10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAATGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAG10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGGGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCGCACCTAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCGCGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CAGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGCGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAATCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCAATGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGAACATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATATCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACACATAAAGAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCCCCGAGCCCACGAGACCAGCAGTGGATGT10.10152284263959391No Hit
CGGAAGGATCATTACCACATTCCGGCCCACGAGACCATCAGTGGATGTCT10.10152284263959391No Hit
CGGAAGGATCATTTCCACACCTAAAAACTTTTCACGTGAACCGTATCAAA10.10152284263959391No Hit
GATGGAGTCAGCGTCGAATAGCCGTTCACTATGTTGCGGTTACTCACTGT10.10152284263959391No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.10152284263959391No Hit
CGGAAGGATCATTACCACATTCCGGCCCACGACACCAGCAGTGGATGTCT10.10152284263959391No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTTCACGTGAACCGTATCAAA10.10152284263959391No Hit
CTGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTTCAGCAGTGGATGTCTAGGCTTTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACACACCTAAAAAACTTCCACGTGAACTGTATCAAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCTGCCCACGAGACCAGCAGTGGATGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAGA10.10152284263959391No Hit
CGGAAGGATCATTACCACTGCAGCAGTGGATGTCTAAGCTCTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTGCATCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGTATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTAACACATCTCCGAGCCCAGACAGCAGTGGATGTCTAG10.10152284263959391No Hit
GATGAGTCAGCGTCGAACATCTACGTTCACTATGTTGCGGTTACTCACTG10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTG10.10152284263959391No Hit
CGGAAGGATCATTACCAAATCTGCAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTACCACATTCCGGCCCACGAGATCAGCAGTGGATGTCT10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACTGTATCAAAA10.10152284263959391No Hit
CGGAAGGATCATTAACACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGTCTCTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCGGCCCACGAGACCAGTGGATGTCTAG10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAAATGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACAGCAGTGAATGTCTAGGCTCTGTCTCTTATAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCGCGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCGGCCCACTAGACCTTCTGTGGTTGTC10.10152284263959391No Hit
AGGAAGGAGCAGTAAAACAGAGGCAGAAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGGATCATTAACACATCTGCAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit
CGGAAGATCATTACCACATCTCCGAGCCCAGACAGCAGTGGATGTCTAGG10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACAGCAGTGGATGTCTAGGC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTTCACGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATAATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGTGGATGTCTAGGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTTAGCTGCCGACCAGCAGTGGATGTCTAG10.10152284263959391No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTTGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAAACGTGTCAAA10.10152284263959391No Hit
CGGAAGGATCATTGCCACATCTGAGCTGCCGACCAGCAGTGGATGTCTAG10.10152284263959391No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAA10.10152284263959391No Hit
GGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAAA10.10152284263959391No Hit
CGCAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGCATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.10152284263959391No Hit
CGAAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCATGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCTACGTGAACTTTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACTCGTAGGCAGCAGTGGATGTCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATTTCTAGGCTCTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCACTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATTATTACCACATTCCGGCCCACGAGACCAGCAGTGGATGTCT10.10152284263959391No Hit
CGGAAGGATCATTACCACCTAAAAACTTTTCACGTGAACCGTATCAAACA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTAACAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACATTCCCGCCCACGAGACCAGCAGTGGATGTCT10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTTCACGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTATAAAACTTCCACGTGAACTGTATCAAG10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCTAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCAGCATTGGATGTCTAGGCTCTGTCTCTTA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATTAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACCAGCAGTGGATCT10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCGCGTGAACAGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTTAT10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCGATCCCACGAGACCAGCAGTGGATGT10.10152284263959391No Hit
CGGAAGGATCATTATCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.10152284263959391No Hit
CGGAAGGATCATTACCACACATAAAAACTTTTCACGTGAACCGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC10.10152284263959391No Hit
CGGAAGGACCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATTCAGGCCCACGAGACCAGCAGTGGATGTCT10.10152284263959391No Hit
CGGAAGGATCATTACGACGAGACACCAGCAGTGGATGTCTAGGCTCTGTC10.10152284263959391No Hit
CGGAAGGATCATTACCACATATCCGAGCCCACGAGACTGCTCGTAATCTC10.10152284263959391No Hit
CGGAGGATCATTACCACACCTAAGAAACTTCCACGTGAACTGTATCAAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC10.10152284263959391No Hit
CAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACAA10.10152284263959391No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGCATCAAA10.10152284263959391No Hit
CGGAAGGATCATTACCACATCTCCAAGCCCACGAGACCAGCAGTGTATGT10.10152284263959391No Hit
CGGAAGGATCATTACCACATTCCGGCCCACGAGACAGCAGTAGATGTCTA10.10152284263959391No Hit
CGGAAGGATCATTACCACCTCAACAGCAGTGGATGTCTAGGCTCTGTCTC10.10152284263959391No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)