FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi737.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi737.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1842
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA51227.795874049945713No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC34418.675352877307276No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC30716.666666666666664No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT19010.314875135722042No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAC854.614549402823019No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA211.1400651465798046No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT160.8686210640608035No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT130.7057546145494028No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA110.5971769815418024No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA90.4885993485342019No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT70.3800217155266015No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA70.3800217155266015No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAA60.32573289902280134No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC60.32573289902280134No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAAACGTATCAAC50.2714440825190011No Hit
CGGAAGGATCATTAACACACCTAAAAACTTCCCCCGTGAACCGTATCAAC50.2714440825190011No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT40.21715526601520088No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC40.21715526601520088No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA40.21715526601520088No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA40.21715526601520088No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA40.21715526601520088No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA40.21715526601520088No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTCCGTGAACCGTATCAAC30.16286644951140067No Hit
CGGAAGGATCATTACCACATCTAAAAACTTCCCCCGTGAACCGTATCAAC30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCAGAAA30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC30.16286644951140067No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAA30.16286644951140067No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC30.16286644951140067No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAGAAACTTCCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC20.10857763300760044No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA20.10857763300760044No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTCCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCATGTGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAAACGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTACCAAC20.10857763300760044No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACATTCCACGTGAACCGTATCAAC20.10857763300760044No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT20.10857763300760044No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAACAATCCACGTGAACCGTCAGAAAT20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTACCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCCGTGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACATGAACCGTATCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTCCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACTACACCTAAAAACTTCCCCCGTGAACCGTATCAAC20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA20.10857763300760044No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCCGTGAACCGTATCAACC20.10857763300760044No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)