FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi735.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi735.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3403
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA130938.46605935938878No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA96328.298560094034674No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT2517.375844842785777No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCTATTAAAC471.3811342932706436No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA401.1754334410813987No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA361.0578900969732588No Hit
CGGAAGGATCATTACCACACAAAAAAAAACTTTCCACGTGAACCGTTGTA320.940346752865119No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTTCCACGTGAACCGTTGTAA300.8815750808110491No Hit
CGGAAGGATCATTACCACCAAAAAAACTTTCCACGTGAACCGTTGTAATT280.8228034087569792No Hit
CGGAAGGATCATTACCACACCAAAAAAAAACTTTCCACGTGAACCGTTGT210.6171025565677344No Hit
CGGAAGGATCATTAACACACCAAAAAAAACTTTCCACGTGAACCGTTGTA200.5877167205406993No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCCACGTGAACCGTTGTAA190.5583308845136644No Hit
CGGAAGGATCATTACCACACCAAAAGAAACTTTCCACGTGAACCGTTGTA160.4701733764325595No Hit
CGGAAGGATCATTACCACACCGAAAAAACTTTCCACGTGAACCGTTGTAA150.44078754040552454No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAT150.44078754040552454No Hit
CGGAAGGATCATTACCACCAAAAAAAACTTTCCACGTGAACCGTTGTAAT110.32324419629738466No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACTGTCGTTAT110.32324419629738466No Hit
CGGAAGGATCATTACCACTCGTCAGCAGTGGATGTCTAGGCTCTGTCTCT90.2644725242433147No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTCTCCACGTGAACCGTTGTA90.2644725242433147No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA90.2644725242433147No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTTCCACGTGAACCGTTGTAA90.2644725242433147No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCAAGTGAACCGTTGTA90.2644725242433147No Hit
CGGAAGGATCATTACCACACCAAAGAAAACTTTCCACGTGAACCGTTGTA80.23508668821627976No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTCCCACGTGAACCGTTGTA70.2057008521892448No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAGCCGTTGTAA70.2057008521892448No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTG60.17631501616220982No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA60.17631501616220982No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAATGTCGTTAT60.17631501616220982No Hit
CGGAAGGATCATTACCACACCAAAGAAACTTTCCACGTGAACCGTTGTAA60.17631501616220982No Hit
CGGAAGGATCATTACCACACCAAAAAGAACTTTCCACGTGAACCGTTGTA60.17631501616220982No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTTGTAA60.17631501616220982No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACTGTCGTTAT50.14692918013517484No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAAACGTTGTA50.14692918013517484No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACTGTCGTTAT50.14692918013517484No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGCAA50.14692918013517484No Hit
CGGAAGGATCATTACCAAACCAAAAAAAACTTTCCACGTGAACCGTTGTA50.14692918013517484No Hit
CGGAAGGATCATTACCACACCGAAAAAAACTTTCCACGTGAACCGTTGTA50.14692918013517484No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTCGTAA50.14692918013517484No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTTCCACGTGAACCGTTGTAA50.14692918013517484No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACAGTTGTAA50.14692918013517484No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGCGAACCGTTGTAA50.14692918013517484No Hit
CGGAAGGATCATACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTAA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAG40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTTCCACGTGAACCGTTGTAA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCATGTGAACCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACGCCAAAAAAAACTTTCCACGTGAACCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTCGTTAT40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAGCCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAGACTTTCCACGTGAACCGTTGTAA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTTTAT40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAGAAAAACTTTCCACGTGAACCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCGCGTGAACCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAGACTTTCCACGTGAACCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTTCCACGTGAACCGTTGTAA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAAGCTTTCCACGTGAACCGTTGTA40.11754334410813988No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACTGTTGTAA40.11754334410813988No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)