FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi734.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi734.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1910
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA129767.90575916230367No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT1417.382198952879582No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC874.554973821989529No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC231.2041884816753925No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA170.8900523560209425No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA160.8376963350785341No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA150.7853403141361256No Hit
CGGAAGGATCATTACCACGTCGTCGGCAGCAGTGGATGTCTAGGCTCTGT150.7853403141361256No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC150.7853403141361256No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA110.5759162303664921No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA100.5235602094240838No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA90.4712041884816754No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA90.4712041884816754No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA80.41884816753926707No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA80.41884816753926707No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA70.36649214659685864No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA70.36649214659685864No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC70.36649214659685864No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA60.31413612565445026No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA60.31413612565445026No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA50.2617801047120419No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG40.20942408376963353No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA40.20942408376963353No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT30.15706806282722513No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA30.15706806282722513No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAA30.15706806282722513No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAA30.15706806282722513No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT30.15706806282722513No Hit
CGGAAGAATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA30.15706806282722513No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA30.15706806282722513No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAA30.15706806282722513No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATTAAA30.15706806282722513No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAA30.15706806282722513No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAAAC20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGTACCGTATCAAA20.10471204188481677No Hit
CGGAAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA20.10471204188481677No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACGTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA20.10471204188481677No Hit
CGAAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACTACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAATACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTATAAACTTTCCACGTGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC20.10471204188481677No Hit
CGGAAGGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACATGAACCGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT20.10471204188481677No Hit
CGGAAGGATCATTACCACCAGCAGTGGATGTCTAGGCTCTGTCTCTTATA20.10471204188481677No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA20.10471204188481677No Hit
CGGAAGGATCATTACACACCTAAAAACTTTCCACGTGAACCGTATCAAAC20.10471204188481677No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)