FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi724.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi724.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences625
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT35957.440000000000005No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC7011.200000000000001No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT436.88No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT254.0No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAAATGTTCTGTTT71.1199999999999999No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAAATGTTCTGTT60.96No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT50.8No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTGTCAAA40.64No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT30.48No Hit
CGGAAGGATCATTACCACAGCAGTTGATGTCTAGGCTCTGTCTCTTATAC30.48No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCGCGTGAAATGTTCTGT30.48No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCCGT30.48No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCATGTGAAATGTTCTGT20.32No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTACCACGTGAAATGTTCTGT20.32No Hit
CGGAAGGATCATTAACACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC20.32No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACATGTTCTGT20.32No Hit
CGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTT20.32No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGAATGTTCTGT20.32No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGCTCTGT20.32No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCACCACGTGAAATGTTCTGT20.32No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAAATGTTCTGT20.32No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA20.32No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACATGAAATGTTCTGT20.32No Hit
GATTAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT20.32No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAACGTTCTGT20.32No Hit
CGGAAGGAGCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC20.32No Hit
CGGAAGGATCATTACCACACCATAAAAACTTACCTCGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCATACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTTTT10.16No Hit
CGGAAGGATTATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT10.16No Hit
CGGAAGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAGACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT10.16No Hit
CGGAAGGATCATTCCCACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGCAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.16No Hit
CGGAAGTATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACAGCAGGGGATGTCTAGGCTCTGTCTCTTATAC10.16No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAAATGTTCTGCT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGTAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACAGCAGTGTATGTCTAGGCTCTGTCTCTTATAC10.16No Hit
CGGAAGGATCATTACCACACCAAAAAATCTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACAGAAGTGGATGTCTAGGCTCTGTCTCTTATAC10.16No Hit
CGGAAGGATCATTACCACACCAAAGAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCCCCCCCCCCCCCCTTACCCCTTGAAATGTTCTGT10.16No Hit
CATAAGGATCATTACCACCAAAAAAACTTACCACGTGAAATGTTCTGTTT10.16No Hit
CGGAAGGATCATTATCACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CTGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.16No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.16No Hit
AGCCCCGGCATGTACATCGGCGACACCTCCGACGGCACGGGCCTGCATCA10.16No Hit
CGGAAGGATCATTACCACAGAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCCCGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAATTACCACGTGAAATGTTCTGTT10.16No Hit
CGGAAGGTTCATTAACACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGC10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAATTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGCTGTCTAGGCTCTGTCTCTT10.16No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGACATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTT10.16No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTATGTCTCTT10.16No Hit
CGGAAGGATCATTACCACACCGAAAAAACTTACCACGTGAATCTGTACTT10.16No Hit
CGGAAGGATCATTACCACATCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.16No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAA10.16No Hit
CGGAAGGATAAGTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGTCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTT10.16No Hit
CGGAAGGATCATAACCAAAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.16No Hit
CGGAAGGATCATTACCACACACCAAAAAAACTTACCACGTGAAATGTTCT10.16No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTT10.16No Hit
GAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTTT10.16No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTATACA10.16No Hit
CGGAGGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGGTCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
GGAAGGCTCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACTGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCGAAAGAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAGAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAGTCTGTACTT10.16No Hit
CGGAAGGATCATTACCACCCAAAAAAACTTACCACGTGAAACGTTCTGTT10.16No Hit
CGGAAGGATCATTAACACACCAAAGAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGGTCTGT10.16No Hit
CCGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAGTGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTGCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGCGAAATGTTCTGT10.16No Hit
CGGAAGGATATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATACA10.16No Hit
GGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAAATGTTCTGTT10.16No Hit
CGGAAGGATCATTAACACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.16No Hit
CGTCCAGCTATGTACATAGGCTCCACCGGCGAGCGCGGCCTGCACCACAT10.16No Hit
CGGAAGGATCATTAACACACCAAGAAAACTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTACCACGTGAAATGTTCTGT10.16No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.16No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTGGCTCTGTCTCTTATACA10.16No Hit

[FAIL]Adapter Content

Adapter graph