FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi718.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi718.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4021
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT205351.056951007212135No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA61515.294702810246207No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATTC2055.098234270082069No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT822.0392937080328277No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT601.4921661278288982No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC581.4424272569012682No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT531.3180800795821936No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT521.2932106441183784No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAATCC230.5719970156677443No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA220.5471275802039294No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG200.4973887092762994No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA190.4725192738124845No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCACTTTGTA150.37304153195722456No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT140.3481720964934096No Hit
CAGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT140.3481720964934096No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT130.3233026610295946No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT100.2486943546381497No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCACTTTGT100.2486943546381497No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT100.2486943546381497No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT100.2486943546381497No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT100.2486943546381497No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT90.22382491917433472No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT90.22382491917433472No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT90.22382491917433472No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT80.19895548371051977No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACAACTTTGTAT80.19895548371051977No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC80.19895548371051977No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT80.19895548371051977No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT80.19895548371051977No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT70.1740860482467048No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAATTC70.1740860482467048No Hit
CGGAAGGATCATTAACACACAAAAAACTATCCACGTGAACCACTTTGTAT70.1740860482467048No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT70.1740860482467048No Hit
CGGAAGGATCATTAACACACCAAAAACTATACACGTGAACCACTTTGTAT70.1740860482467048No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTAATTC60.14921661278288983No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA60.14921661278288983No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC60.14921661278288983No Hit
CGGAAGGATTATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT50.12434717731907485No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT50.12434717731907485No Hit
CGGAAGGATCATTACCACACAAAAAACTATACACGTGAACCACTTTGTAT50.12434717731907485No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATAG50.12434717731907485No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAATTCA50.12434717731907485No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT50.12434717731907485No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCATTTTGTAT50.12434717731907485No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT50.12434717731907485No Hit
CGGAAGGATCATTACCACACCAAAAACTATTCACGTGAACCACTTTGTAT50.12434717731907485No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA50.12434717731907485No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA50.12434717731907485No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)