FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi717.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi717.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences828
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT20725.0No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC12515.096618357487923No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA11714.130434782608695No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT738.816425120772948No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC647.729468599033816No Hit
CGGAAGGATCATTACCACATCTCCGAGCCACGAGACCAGCAGTGGATGTC333.985507246376811No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC222.657004830917874No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT161.932367149758454No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT141.6908212560386473No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTATATA60.7246376811594203No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.6038647342995169No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGAATCTGTACTT40.4830917874396135No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT40.4830917874396135No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC30.36231884057971014No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.36231884057971014No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGTATGTCTAGGCTCTGTCTC30.36231884057971014No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA30.36231884057971014No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTATAGGCTCTGTCTC20.24154589371980675No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTT20.24154589371980675No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTCTGTA20.24154589371980675No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT20.24154589371980675No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTC20.24154589371980675No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACCT20.24154589371980675No Hit
AGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC20.24154589371980675No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC20.24154589371980675No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC20.24154589371980675No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAATCTGTACTTT20.24154589371980675No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAC20.24154589371980675No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGATAGCAGTGGATGTCTAGGCTCTGTCTCT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACTCGTCCGCAGCAGTGGATGTCTAGGCTCTGTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGCACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACGCCAAAGACTATCCATGTGAACCGTTAACCAA10.12077294685990338No Hit
CGGAAGGATATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT10.12077294685990338No Hit
CGGAAGGAGCATTACCACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.12077294685990338No Hit
CGGAAGATCATTACCACATCTCCGAGCCACGAGACCAGCAGTGGATGTCT10.12077294685990338No Hit
CGGAAGGAGAAGGAGAACACCAAAAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGCCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTACACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACATCTCCGAGTCACGAGACCAGCAGTGGATGTC10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGACATCAGTGGATGTCTAGGCTCTGTCTCT10.12077294685990338No Hit
CGGAAGGATCATTACCACATCTCCGAGCCACTAGACCAGCAGTGGATGTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCAACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCTTACCACACCAAAAAAACTTACCACGTGAATCTGTACTTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAATAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCAAAACAAAAACCTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CAGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC10.12077294685990338No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCCGTGGATGTCTAGGCTCTGT10.12077294685990338No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGATGTCTAGCTCTGTC10.12077294685990338No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.12077294685990338No Hit
CGGAAAGATCATTACCACATCTCCGAGCCACGAGACCAGCAGTGGATGTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACAAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
GCGTAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACT10.12077294685990338No Hit
CGGAAGGATCATTAACACATCGTCGGCAGCAGTGGATGTCTAGGCTCTGT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTACCACGTGAATCTGTACT10.12077294685990338No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTGTAGGCTATGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTACATA10.12077294685990338No Hit
CGGAAGGATTATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGTAAGGATCATTACCACATCTCCGAGCCACTAGACCAGCAGTGGATGCT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACATCTCCGAGCCACGATACCAGAAGTGGATGTC10.12077294685990338No Hit
CGGAAGGATCATTACCATACCAAAAAGCTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC10.12077294685990338No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTATGTC10.12077294685990338No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTGCCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTAACACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCACTACCACACCAAAAAACTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACATCGTCGGCAGCAGTGGGTGTCTAGGCTCTGT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTACATAC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC10.12077294685990338No Hit
CGAAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCTGTACTTT10.12077294685990338No Hit
CGGAAGGATCATTACAACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGTTCGTGCGCAAGTGACTGTCTCTTATACACATCTCCGAGCCCACGAG10.12077294685990338No Hit
CGGAAGGATAATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACT10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCCCGAGGCCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGACCAGCTGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACAAAAAAACTTACCACGTGAATCTGTACTTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAACAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCGTATCAA10.12077294685990338No Hit
CGGAAGGATCATTATCACACCAAAAAACTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACAAGGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACTCGTCGGCATCAGTGGATGTCTAGGCTCTGTC10.12077294685990338No Hit
CGGAAGGACATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCCGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTAAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCGCGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTATCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGTATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.12077294685990338No Hit
CGGAAGGATCATACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCCCGTGAACCGTTACATA10.12077294685990338No Hit
CCGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACT10.12077294685990338No Hit
CGGAAGGATCATTACCAAACCAAAAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACATCTCCGAGCCACAAGACCAGCAGTGGATGTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAATGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGTATCTGTACTTT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATAC10.12077294685990338No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC10.12077294685990338No Hit
CGGAAGGATTATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGTAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTACATA10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGATCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACATCGTCTTCAGCAGTGGATGTCTAGGCTCTGT10.12077294685990338No Hit
CGGAAGGATCATTACCAGACCAAAAAAGCTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCGCGTGAACCGTATCAACAA10.12077294685990338No Hit
CGGAAGGATCATTAACACATCGTCGGCAGCAGTGGATGTCTAGGCCTCTG10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACTGTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGAGGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAGCTTTGTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTTTCGTTAT10.12077294685990338No Hit
CGGAAGGATCATTACCACACTAAAAAAACTTACCACGTGAATCTGTACTT10.12077294685990338No Hit
CGGAAGGATCATTACCAAGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.12077294685990338No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTACATACC10.12077294685990338No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)