FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi713.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi713.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC3625.352112676056336No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCGTTAACCAA2215.492957746478872No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT149.859154929577464No Hit
CGGAAGGATCATTACCACATCTGAGCGAACAGCAGTGGATGTCTAGGCTC149.859154929577464No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT149.859154929577464No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC128.450704225352112No Hit
CGGAAGGATCATTAACACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC32.112676056338028No Hit
CGGAAGGATCATTACCAAAGCAGTTGATGTCTAGGCTCTGTCTCTTATAC10.7042253521126761No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCACT10.7042253521126761No Hit
CGGAAGGATCATTACCACATATGAGCGAACAGCAGTGGATGTCTAGGCTC10.7042253521126761No Hit
CGGAAGGATCATTACCACAGCTAAAACTATCCACGTGAACCGTTAACCAA10.7042253521126761No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGATCTGTCTCTTAT10.7042253521126761No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATATCTAGGCTCTGTC10.7042253521126761No Hit
CGTAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.7042253521126761No Hit
CGGAAGGATCATTAACACAGCAGTGGATGTCTAGGCTCTGTCTCTATACA10.7042253521126761No Hit
CGGAAGGATAATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.7042253521126761No Hit
CGGAAGGATCATTACCACTCGTCGTCAGCAGTGGATGTCTAGGCTCTGTC10.7042253521126761No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGCACCGTTAACCAA10.7042253521126761No Hit
CGGAAGGATCATTACCACACGTCGGCAGCAGTGGATGTCTAGGCTCTGTC10.7042253521126761No Hit
CGGAAGGATCATTACCACACGTCGGCAGCAGTGGATGTCTAGGCTTTGTC10.7042253521126761No Hit
CAGAAGGATCATTACCACATCTGAGCGAACAGCAGGGGATGTCTAGGCTC10.7042253521126761No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT10.7042253521126761No Hit
CGGAAGGATCATTACCACATCTGAGCGAACAACAGTGGATGTCTAGGCTC10.7042253521126761No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTATGCCCTGTCTCT10.7042253521126761No Hit
CGGAAGGATCATTAACACACCTAAAACTATCCACGTGAACCGTTAACCAA10.7042253521126761No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA10.7042253521126761No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGATGTCTAGGATCTGTCT10.7042253521126761No Hit
CGGAAGGATCATTACTACATCTGAGCGAACAGCAGTGGATGTCTAGGCTC10.7042253521126761No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCCCTTATAC10.7042253521126761No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTACAC10.7042253521126761No Hit
CGGAAGGATCATTACCACGAAACAGCAGTGGATGTCTAGGTTCTGTCTCT10.7042253521126761No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGATCTGTCTCT10.7042253521126761No Hit
CGGAAGGATCCTTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC10.7042253521126761No Hit
CGGAAGGATCATTACCACATCTTAGCGAACAGCAGTGGATGTCTAGGCTC10.7042253521126761No Hit

[FAIL]Adapter Content

Adapter graph