FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi704.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi704.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1988
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC75437.927565392354126No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA67634.00402414486921No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC311.5593561368209254No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT301.5090543259557343No Hit
CGGAAGGATCATTACCACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT221.1066398390342052No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTCCACGTGAACTGTATCAAAA160.8048289738430584No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC160.8048289738430584No Hit
CGGAAGGATCATTACCACACCTAAAACTTTCCACGTGAACCGTATCAAAC150.7545271629778671No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATCAAA140.7042253521126761No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAAATGTATCAAA140.7042253521126761No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC130.653923541247485No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA130.653923541247485No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC120.6036217303822937No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATCAAA110.5533199195171026No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC90.45271629778672035No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA90.45271629778672035No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATCAAA80.4024144869215292No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC80.4024144869215292No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTCCACGTGAACTGTATCAAA60.30181086519114686No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC60.30181086519114686No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAA60.30181086519114686No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC40.2012072434607646No Hit
CGGAAGGATCATTACCACATCTAAAAACTTTCCACGTGAACCGTATCAAC40.2012072434607646No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC40.2012072434607646No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAC40.2012072434607646No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC40.2012072434607646No Hit
CGGAAGGATCATTAACACACAGCAGTGGATGTCTAGGCTCTGTCTCTTAT40.2012072434607646No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCCCACGTGAACTGTATCAAA40.2012072434607646No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC40.2012072434607646No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAGA40.2012072434607646No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATCAAA30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATCAAA30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGCATCAAA30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA30.15090543259557343No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTCCACGTGAACTGTATCAAA30.15090543259557343No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATCAAAAC30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGAGAACCGTATCAAC30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAC30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA30.15090543259557343No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAATTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACTACCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCTAA20.1006036217303823No Hit
CGGAAGGAACATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACTCCTAAAAACTTTCCACGTGAACCGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTATAGGCTCTGTCTC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCATGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGCATCAAC20.1006036217303823No Hit
CGTAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGTATGTCTAGGCTCTGTCTC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCGAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTGTCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCATACCTAAAAACTTTCCACGTGAACCGTATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATCAAA20.1006036217303823No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC20.1006036217303823No Hit
CGGAAGGATCATTACTACACCTAAAAAACTTCCACGTGAACTGTATCAAA20.1006036217303823No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)