FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi703.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi703.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3778
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA93424.7220751720487No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT59115.643197458973003No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT44511.7787188988883No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA3308.734780307040763No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC1704.499735309687666No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA1524.023292747485442No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTACAAT942.4880889359449445No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC340.8999470619375332No Hit
CGGAAGGATCATTACCACACAAAAAAAACTATCCACGTGAACCGTCAAAA280.7411328745367919No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTACAAT280.7411328745367919No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCAGTGAACCGTTAAACAA230.6087877183695076No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCACTTTGT200.5293806246691372No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAAC180.4764425622022234No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA180.4764425622022234No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT160.42350449973530974No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA150.39703546850185284No Hit
CGGAAGGATCATTAACACACCAAAAAAACTATCCACGTGAACCGTCAAAA120.31762837480148226No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT120.31762837480148226No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT120.31762837480148226No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT120.31762837480148226No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAGAA110.2911593435680254No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT110.2911593435680254No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT110.2911593435680254No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATAG100.2646903123345686No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA100.2646903123345686No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT90.2382212811011117No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACAGTCAAAA90.2382212811011117No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAAGC90.2382212811011117No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTACAT80.21175224986765487No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA80.21175224986765487No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT70.18528321863419797No Hit
CGGAAGGATCATTACCACCAAAAAAACTATCCACGTGAACCGTCAAAAAA70.18528321863419797No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT70.18528321863419797No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAGAAA70.18528321863419797No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA70.18528321863419797No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAGA70.18528321863419797No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCGAAA60.15881418740074113No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCACTTTGTA60.15881418740074113No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT60.15881418740074113No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCTCGTGAACCACTTTGTAT60.15881418740074113No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTAAACA60.15881418740074113No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTATCCACGTGAACCGTCAAAA50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTTAACCGTCAAAA50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAGAACTATCCACGTGAACCGTCAAAA50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCATTAAACA50.1323451561672843No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTATACCG50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT50.1323451561672843No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT50.1323451561672843No Hit
CGGAAGGATCATTACCACACCAAAAAAACTACCCACGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCATGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGGACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAACA40.10587612493382743No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA40.10587612493382743No Hit
CGGAAGGATCATTACCACACATAAAAAACTATCCACGTGAACCGTTAAGC40.10587612493382743No Hit
CGGAAGGATCATTATCACACCAAAAAAACTATCCACGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAAACCATCCACGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAAAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAGAAACTATCCACGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAGAAAAACTATCCACGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAACTATCTACGTGAACCACTTTGTAT40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAGACTATCCACGTGAACCGTCAAAA40.10587612493382743No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAGCCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT40.10587612493382743No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCGCGTGAACCGTCAAAA40.10587612493382743No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC40.10587612493382743No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGCGAATTGTTACAATA40.10587612493382743No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTACATACC40.10587612493382743No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)