FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi701.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi701.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2978
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC149250.10073875083949No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA74224.91605104096709No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA752.5184687709872398No Hit
CGGAAGGATCATTACCACAGACAGCAGTGGATGTCTAGGCTCTGTCTCTT441.4775016789791806No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCTATACCG290.9738079247817327No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTACAAT210.7051712558764271No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC180.6044325050369375No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC180.6044325050369375No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA170.5708529214237743No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCGTCAGCAGTGGATGTCTAGGC130.4365345869711216No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC130.4365345869711216No Hit
CGGAAGGATCATTACCACACCCAAAAAAACTTCCACGTGAACTGTATCAA120.4029550033579583No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC110.36937541974479515No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC110.36937541974479515No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC100.33579583613163194No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC100.33579583613163194No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC100.33579583613163194No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC90.30221625251846873No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC90.30221625251846873No Hit
CGGAAGGATCATTACCACCTAAAAAAACTTCCACGTGAACTGTATCAAAA80.2686366689053056No Hit
CGGAAGGATCATTACCACACATAAAAAAACTTCCACGTGAACTGTATCAA80.2686366689053056No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTCCCACGTGAACTGTATCAA80.2686366689053056No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC70.23505708529214236No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA70.23505708529214236No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC60.20147750167897915No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC60.20147750167897915No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC60.20147750167897915No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACCGTATCAA60.20147750167897915No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC60.20147750167897915No Hit
CGGAAGGATCATTAACACACCTAAAAAAACTTCCACGTGAACTGTATCAA60.20147750167897915No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATCAAAA60.20147750167897915No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC50.16789791806581597No Hit
CGGAAGGATCATTACCACACCTAAAAGAACTTCCACGTGAACTGTATCAA50.16789791806581597No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC50.16789791806581597No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAC50.16789791806581597No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC40.1343183344526528No Hit
CAGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAC40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGACCTGTATCAA40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC40.1343183344526528No Hit
CGGAAGGATCATTACCACGCCTAAAAAAACTTCCACGTGAACTGTATCAA40.1343183344526528No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAG40.1343183344526528No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAGCTGTATCAA30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTGTCAA30.10073875083948958No Hit
CGGAAGGACCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10073875083948958No Hit
CGGAAGGATCATTACTACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTAACAAC30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAAGACTTCCACGTGAACTGTATCAA30.10073875083948958No Hit
CGGAAGGATCATTACCCCACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10073875083948958No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGGACCGTTACAAT30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATCAAA30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAC30.10073875083948958No Hit
CGGAAGTATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC30.10073875083948958No Hit
CGGAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTACCAA30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGCGAACTGTATCAA30.10073875083948958No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT30.10073875083948958No Hit
GGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC30.10073875083948958No Hit
CGGAAGGATCTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACC30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAGAAAACTTCCACGTGAACTGTATCAA30.10073875083948958No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCTACGTGAACCGTATCAAC30.10073875083948958No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)