FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi697.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi697.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7999
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT543467.93349168646081No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA7999.988748593574197No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC3003.7504688086010747No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATAG600.750093761720215No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT520.6500812601575197No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT460.5750718839854981No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT440.5500687585948244No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT430.5375671958994874No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT290.3625453181647706No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT270.3375421927740968No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT260.32504063007875983No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT250.3125390673834229No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT230.28753594199274907No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT220.2750343792974122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCACTTTGT200.25003125390673836No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT190.23752969121140144No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT180.2250281285160645No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT180.2250281285160645No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC170.2125265658207276No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT170.2125265658207276No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTCTGTAT170.2125265658207276No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT160.20002500312539068No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT150.18752344043005376No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT150.18752344043005376No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT150.18752344043005376No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT140.17502187773471684No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT140.17502187773471684No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT130.16252031503937991No Hit
CGGAAGGATCATTACCACATCAAAAACTATCCACGTGAACCACTTTGTAT130.16252031503937991No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTAAACCACTTTGTAT130.16252031503937991No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT130.16252031503937991No Hit
CGGAAGGATCATACCACACCAAAAACTATCCACGTGAACCACTTTGTATA120.15001875234404302No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT120.15001875234404302No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA120.15001875234404302No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATTCAAC110.1375171896487061No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA110.1375171896487061No Hit
CGGAAGGATCATTACCACATCTCCGAGCCCACGAGACTCTCTATGATCTC100.12501562695336918No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT100.12501562695336918No Hit
CGGAAGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATA100.12501562695336918No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGTACCACTTTGTAT100.12501562695336918No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA90.11251406425803225No Hit
TGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT90.11251406425803225No Hit
CGGAAGGATCATTACCACACTAAAAACTATCCACGTGAACCACTTTGTAT90.11251406425803225No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA90.11251406425803225No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCAATTTGTAT90.11251406425803225No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA80.10001250156269534No Hit
CGGAAGGTCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTATA80.10001250156269534No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA80.10001250156269534No Hit
CGGAAGGATCATTACCACACCAAAAACTATTCACGTGAACCACTTTGTAT80.10001250156269534No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTACTTTGTAT80.10001250156269534No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAATCACTTTGTAT80.10001250156269534No Hit
CGGAAGGATCATTACCACACCAAAAACTATCACGTGAACCACTTTGTATA80.10001250156269534No Hit
CGGAAGAATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT80.10001250156269534No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)