FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi695.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi695.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1222
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA87871.84942716857611No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA373.027823240589198No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA352.8641571194762685No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA110.900163666121113No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA100.8183306055646482No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA90.7364975450081833No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA80.6546644844517185No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA80.6546644844517185No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA70.5728314238952537No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC70.5728314238952537No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAA60.4909983633387889No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC60.4909983633387889No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAATCGTATCAAA50.4091653027823241No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAA50.4091653027823241No Hit
CGGAAGAATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.4091653027823241No Hit
CAGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.4091653027823241No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAA50.4091653027823241No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA50.4091653027823241No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGCATCAAA40.32733224222585927No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA40.32733224222585927No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAA40.32733224222585927No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG40.32733224222585927No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC40.32733224222585927No Hit
CGGAAGGATCATTAACACACATAAAAACTTTCCACGTGAACCGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAT30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTAACAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGAGAACCGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATCAAA30.24549918166939444No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAA30.24549918166939444No Hit
TGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTTTTCCGTATCAAA20.16366612111292964No Hit
CGGAAGGAACATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAAACGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATAACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACCTAAATACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACCTGAAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACCTATAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA20.16366612111292964No Hit
AGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA20.16366612111292964No Hit
CGGAAGGATCATTACCACACATAAAAAATTTCCACGTGAACCGTATCAAA20.16366612111292964No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)