FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi694.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi694.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2921
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA197367.54536117767887No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC2237.634371790482711No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT1334.553235193426908No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA290.9928106812735364No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA260.890106128038343No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC230.7874015748031495No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA220.7531667237247518No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA170.5819924683327627No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA130.4450530640191715No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA110.3765833618623759No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTAAGC110.3765833618623759No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA100.3423485107839781No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA100.3423485107839781No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA90.3081136597055803No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA90.3081136597055803No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTTCCACGTGAACCGTATTCA90.3081136597055803No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA80.27387880862718245No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA80.27387880862718245No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA80.27387880862718245No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA70.23964395754878468No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTATTCA70.23964395754878468No Hit
CGGAAGGATCATTACCACCCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT70.23964395754878468No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA60.20540910647038688No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTTCCACGTGAACCGTATTCA60.20540910647038688No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGACCCGTATTCA60.20540910647038688No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATTCA60.20540910647038688No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGCATTCA50.17117425539198905No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA50.17117425539198905No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA50.17117425539198905No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA50.17117425539198905No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG40.13693940431359122No Hit
TGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCATGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA40.13693940431359122No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATACA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCCAAAAAACTATCCACGTGAACCGTTAAGC40.13693940431359122No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA40.13693940431359122No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACAGTATTCA30.10270455323519344No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA30.10270455323519344No Hit
CGGAAGGATCATTACCCCACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10270455323519344No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA30.10270455323519344No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA30.10270455323519344No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCTCGTGAACCGTATTCA30.10270455323519344No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA30.10270455323519344No Hit
CGGAAGGATCATTAACACACCTAAAAAACTATCCACGTGAACCGTTAAGC30.10270455323519344No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGTACCGTATTCA30.10270455323519344No Hit
CGGAAGGATCATTACTACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10270455323519344No Hit
CGGAAGGATCATTACCACACATAAAAAACTATCCACGTGAACCGTTAAGC30.10270455323519344No Hit
CGGAAGGTCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10270455323519344No Hit
CAGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10270455323519344No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)