FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi693.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi693.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2951
Sequences flagged as poor quality0
Sequence length301
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA239080.9894950864114No Hit
CGGAAGGATCATTACCACACATAAAAAACTTTCCACGTGAACCGTATTCA301.0166045408336157No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTTCCACGTGAACCGTATTCA301.0166045408336157No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTTCACGTGAACCTGTTCTG280.9488309047780413No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTACTCA180.6099627245001694No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGGACCGTATTCA160.5421890884445951No Hit
CGGAAGGATCATTACCACACCTAAAAAGCTTTCCACGTGAACCGTATTCA150.5083022704168079No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGCGAACCGTATTCA140.47441545238902066No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTCAA140.47441545238902066No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAGCCGTATTCA140.47441545238902066No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC120.40664181633344626No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTTCCACGTGAACCGTATTCA120.40664181633344626No Hit
CGGAAGGATCATTACCACCTAAAAAACTTTCCACGTGAACCGTATTCAAC120.40664181633344626No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCCA110.3727549983056591No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTTCCACGTGAACCGTATTCA100.3388681802778719No Hit
CGGAAGGATCATTACCACACCTAAGAAACTTTCCACGTGAACCGTATTCA100.3388681802778719No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTTCCACGTGAACCGTATTCA80.27109454422229756No Hit
CGGAAGGATCATTACCACACCTGAAAAACTTTCCACGTGAACCGTATTCA80.27109454422229756No Hit
CGGAAGGATCATTACCACACCCAAAAAACTTTCCACGTGAACCGTATTCA80.27109454422229756No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCTCCACGTGAACCGTATTCA80.27109454422229756No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCCACGTGAACCGTATTCA80.27109454422229756No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTTCCACGTGAACCGTATTCA70.23720772619451033No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCG70.23720772619451033No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTTAACCGTATTCA70.23720772619451033No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACTGTATTCA70.23720772619451033No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTTA60.20332090816672313No Hit
CGGAAGGATCATTACCAAACCTAAAAAACTTTCCACGTGAACCGTATTCA60.20332090816672313No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCGCGTGAACCGTATTCA60.20332090816672313No Hit
CGGAAGGATCATTATCACACCTAAAAAACTTTCCACGTGAACCGTATTCA50.16943409013893596No Hit
CGGAAGGATCATTACTACACCTAAAAAACTTTCCACGTGAACCGTATTCA50.16943409013893596No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGCATTCA50.16943409013893596No Hit
CGGAAGTATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA50.16943409013893596No Hit
CGGAAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTC40.13554727211114878No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTGTTCA40.13554727211114878No Hit
CAGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA40.13554727211114878No Hit
CGGAAGGATCATTACCACATCTAAAAAACTTTCCACGTGAACCGTATTCA40.13554727211114878No Hit
CGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10166045408336156No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCCACGTGAACTGTATCAA30.10166045408336156No Hit
CGGAAGGATCTTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10166045408336156No Hit
TGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10166045408336156No Hit
CGGAAGAATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10166045408336156No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTTCCACGTGAACCGTATTCA30.10166045408336156No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAATCGTATTCA30.10166045408336156No Hit
CGGAAGGATCATCACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10166045408336156No Hit
CGGAAGGATTATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA30.10166045408336156No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTAAACCGTATTCA30.10166045408336156No Hit
CGGAAGGATCATACCACACCTAAAAAACTTTCCACGTGAACCGTATTCAA30.10166045408336156No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)