FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi692.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi692.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences538
Sequences flagged as poor quality0
Sequence length301
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA27050.18587360594795No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC8215.241635687732341No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA397.24907063197026No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC112.0446096654275094No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTATCAAC81.486988847583643No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT71.3011152416356877No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA50.929368029739777No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAA50.929368029739777No Hit
GATGAGTCAGCGTCGAACATGCAACATTTATTGCATGATACGTGGCATTT50.929368029739777No Hit
CGGAAGGATCATTACCACCATAAAACTTTCCACGTGAACCGTTGTAAATA40.7434944237918215No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAAACGTTGTAAA40.7434944237918215No Hit
CGGAAGGATCATTACCACGCCATAAAACTTTCCACGTGAACCGTTGTAAA30.5576208178438662No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTTTAAA30.5576208178438662No Hit
CGGAAGGATCATTACCACACCGTAAAACTTTCCACGTGAACCGTTGTAAA20.37174721189591076No Hit
CGGAAGGATCATTACCACACAATAAAACTTTCCACGTGAACCGTTGTAAA20.37174721189591076No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTAAACA20.37174721189591076No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGCTGTAAA20.37174721189591076No Hit
CGGAAGGATCATTACCACAGCAGTGGATGTCTAGGCTCTGTCTCTTATAC20.37174721189591076No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC20.37174721189591076No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA20.37174721189591076No Hit
CGGAAGGATCATACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA20.37174721189591076No Hit
CGGAAGGATCATTACCACACCATAAAACCTTCCACGTGAACCGTTGTAAA20.37174721189591076No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCCCGTTAAACCTTTTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAACA10.18587360594795538No Hit
CAGAAGGATCATTACCACACCTAATAAACTATCCACGTGAACCGTCAAAA10.18587360594795538No Hit
GGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAACA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATAATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATTCCTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAA10.18587360594795538No Hit
CGGAAGGATCATTACCACGAGAAAGCAGTGGATGTCTAGGCTCTGTCTCT10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAGA10.18587360594795538No Hit
CGGAAGGATCATACCACACCAAAAAACTATCCACGTGAACCGTTAAACAA10.18587360594795538No Hit
AGGCCGGCCATGTATATCGGCTCGACCGGACCGCGCGGCCTGCACCACCT10.18587360594795538No Hit
TGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAGAACTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTAGTAAA10.18587360594795538No Hit
CGGAAGGATCATTAACACACCATAAAACTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGGAAGGATCCTTACCACACCTAAAAACTTTCCACGTGAACCGTATCAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAGCTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTATA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGGACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACTATAAAACTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCATTAAACA10.18587360594795538No Hit
CGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAAT10.18587360594795538No Hit
CGGAAGGATCATTACCACGTGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.18587360594795538No Hit
CGGAAGGATCATTATCACACCATAAAACTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACAAAAAAACTTTCCACGTGAACCGTTGTAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACAGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACTCAGCAGTGATGTCTAGGCTCTGTCTCTTATA10.18587360594795538No Hit
GAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAATA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTATCCACGTGAACCGTTAAACT10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGGACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAATCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACTTGAAACGTTGTAAA10.18587360594795538No Hit
CGACCGGGCATGTACATTGGCGACACCGATGACGGATCGGGCCTGCATCA10.18587360594795538No Hit
CGGAAGGATCATTACCAAAGCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTCCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCCGTCTC10.18587360594795538No Hit
CGGAAGGATCATTACCACGCCATAAACTTTCCACGTGAACCGTTGTAAAT10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTAAACA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAG10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAATAAACTATCCACGTGAACCGTCAAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCACTGTCTCTTA10.18587360594795538No Hit
AGACCAGGAATGTATATTGGGTCCACCGGTGAGCGCGGACTCCATCACCT10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACCGTAACCATATCTAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAGCAGTGGATGTCTAGGCTCTGTCTCTTA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACCGTTGTAAT10.18587360594795538No Hit
CTGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGACCGTATCAACA10.18587360594795538No Hit
CTTCCTTCTCCTTCCCCCCCCCTCCCCCTTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAAATTTCCACGTGAACCGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGCAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACACCATAAAACTTTCCACGTGAACTGTTGTAAA10.18587360594795538No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACGGGACAGCAGTGGATGTCTAGTCTCTGTCTCT10.18587360594795538No Hit
CGGAAGGAGCATTACCACGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.18587360594795538No Hit
CGGAAGGATCATTACCACACAATAAAACTTTCCACGTGAACCGTATCAAC10.18587360594795538No Hit
CGGAAGGATCATTACCACCCATAAAACTTTCCACGTGAACCGTTGTAAAT10.18587360594795538No Hit
CGGAAGGATCATACCACACCATAAAACTTTCCACGTGAACCGTTGTAAAT10.18587360594795538No Hit
GCTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGA10.18587360594795538No Hit
CGGAAGGATCATTAACACTCAGCAGTGGATGTCTAGGCTCTGTCTCTTAT10.18587360594795538No Hit
CGGAAGGATCATTACCAAGAGACCAGCAGTGGATGTCTAGGCTCTGTCTC10.18587360594795538No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)