FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi685.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi685.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5639
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA438177.69107997871963No Hit
CGGAAGGATCATTACCACACAAAAAAACTATCCACGTGAACCGTTAAACA470.8334811136726369No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA460.815747472956198No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAAACGTTAAACA420.7448129100904416No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAG400.7093456286575633No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA400.7093456286575633No Hit
CGGAAGGATCATTAACACACCAAAAAACTATCCACGTGAACCGTTAAACA350.6206774250753679No Hit
CGGAAGGATCATTACCACGCCAAAAAACTATCCACGTGAACCGTTAAACA290.5142755807767334No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGCGAACCGTTAAACA280.49654194006029434No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAGCCGTTAAACA280.49654194006029434No Hit
CGGAAGGATCATTACCACCAAAAAACTATCCACGTGAACCGTTAAACAAA260.4610746586274162No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGGACCGTTAAACA250.4433410179109771No Hit
CGGAAGGATCATTACCACACCAAAAAACTAACCACGTGAACCGTTAAACA240.425607377194538No Hit
CGGAAGGATCATTACCACTCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA240.425607377194538No Hit
CGGAAGGATCATTACCACACCAAAAGACTATCCACGTGAACCGTTAAACA220.39014009576165987No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTAAACAA210.3724064550452208No Hit
CGGAAGGATCATTACCACACCAAAAAACTACCCACGTGAACCGTTAAACA200.35467281432878167No Hit
CGGAAGGATCATTACCACACCAAGAAACTATCCACGTGAACCGTTAAACA190.33693917361234266No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCGCGTGAACCGTTAAACA190.33693917361234266No Hit
CGGAAGGATCATTACCACACCGAAAAACTATCCACGTGAACCGTTAAACA180.31920553289590353No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA170.30147189217946446No Hit
CGGAAGGATCATTACCACACCAAAAAGCTATCCACGTGAACCGTTAAACA160.28373825146302534No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAGACA160.28373825146302534No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGCTAAACA150.26600461074658627No Hit
CGGAAGGATCATTACCACACCCGGGATCCACGATCTTGCTCCTAGGTTAA150.26600461074658627No Hit
CGGAAGGATCATTACCACACCAAAGAACTATCCACGTGAACCGTTAAACA150.26600461074658627No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACG140.24827097003014717No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATTCA130.2305373293137081No Hit
CGGAAGGATCATTACCACACCAAAAAAATATCCACGTGAACCGTTAAACA130.2305373293137081No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAACA130.2305373293137081No Hit
CGGAAGGATCATTACCACACCAAAAAACTGTCCACGTGAACCGTTAAACA120.212803688597269No Hit
CGGAAGGATCATACCACACCAAAAAACTATCCACGTGAACCGTTAAACAA120.212803688597269No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCGACGTGAACCGTTAAACA120.212803688597269No Hit
CGGAAGGATTATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA120.212803688597269No Hit
CGGAAGGATCATTACCACATCCAGCAGTGGATGTCTAGGCTCTGTCTCTT120.212803688597269No Hit
CGGAAGGATCATTACCACACCAGAAAACTATCCACGTGAACCGTTAAACA110.19507004788082993No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTGAACA110.19507004788082993No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCATGTGAACCGTTAAACA80.14186912573151267No Hit
CGGAAGGATCATTACCACACCAAAAAACCATCCACGTGAACCGTTAAACA80.14186912573151267No Hit
CGGAAGGATCATTATCACACCAAAAAACTATCCACGTGAACCGTTAAACA80.14186912573151267No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCATTAAACA80.14186912573151267No Hit
CGGAAGGATCATTACCAAACCAAAAAACTATCCACGTGAACCGTTAAACA70.12413548501507359No Hit
CGGAAGGATCATTACCCCACCAAAAAACTATCCACGTGAACCGTTAAACA70.12413548501507359No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTTAAACA70.12413548501507359No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACT70.12413548501507359No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCTCGTGAACCGTTAAACA60.1064018442986345No Hit
TGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA60.1064018442986345No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACATGAACCGTTAAACA60.1064018442986345No Hit
CGGAAGGATCATTACCACACTAAAAAACTATCCACGTGAACCGTTAAACA60.1064018442986345No Hit
CGGAAGGATCATTACCACACCAAAAAATTATCCACGTGAACCGTTAAACA60.1064018442986345No Hit
CGGAAAGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA60.1064018442986345No Hit
CGGAAGGACCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA60.1064018442986345No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAATA60.1064018442986345No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)