FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi683.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi683.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7729
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT310340.147496441971796No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA187324.233406650278173No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGTTAT108514.038038556087463No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTTCCACGTGAACCGTTGTA1341.7337301073877605No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCCCGTGAACCGTATCAAC680.879803338077371No Hit
CGGAAGGATCATTACCACATCAGCAGTGGATGTCTAGGCTCTGTCTCTTA340.4399016690386855No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT340.4399016690386855No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG330.42696338465519473No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGTAAT320.4140251002717039No Hit
CGGAAGGATCATTACCACTCGGCAGCAGTGGATGTCTAGGCTCTGTCTCT290.37521024712123174No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC290.37521024712123174No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT260.3363953939707595No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT240.31051882520377794No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTTCCACGTGAACTGTATCA230.29758054082028723No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTTCCACGTGAACCGTTGTAA210.2717039720533057No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTTGTAATT200.25876568766981495No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTTGAACA190.24582740328632424No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT180.23288911890283348No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT180.23288911890283348No Hit
CGGAAGGATCATTACCACCAAAAAAACTTTCCACGTGAACCGTTGTAATT170.21995083451934275No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT150.19407426575236125No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT150.19407426575236125No Hit
CGGAAGGATCATTACCACACCAAAAAACTTTCCACGTGAACCGTTGTAAT150.19407426575236125No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCACTTTGTA140.1811359813688705No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT140.1811359813688705No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT140.1811359813688705No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT130.16819769698537976No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT130.16819769698537976No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT130.16819769698537976No Hit
CGGAAGGATCATTACCACACCTAAAACTATCCACGTGAACCACTTTGTAT120.15525941260188897No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAGCCGTTGTAA120.15525941260188897No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT110.14232112821839824No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT110.14232112821839824No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCACTTTGT100.12938284383490747No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT100.12938284383490747No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCTTTAT100.12938284383490747No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTTCCACGTGAACCGTTGTAA100.12938284383490747No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACTGTCGTTATT100.12938284383490747No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT100.12938284383490747No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT90.11644455945141674No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTTCCACGTGAACCGTTGTAA90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGGACCGTTGTAA90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAAACCATCCACGTGAACCACTTTGTAT90.11644455945141674No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTTGTAA90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAACTATCCACGTGAACCACTTTGTATT90.11644455945141674No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACTGTCGTTATTT90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT90.11644455945141674No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC90.11644455945141674No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACTGTTGTAA90.11644455945141674No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACTGTCGTTAT80.10350627506792598No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGCTGTAA80.10350627506792598No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTCCCACGTGAACCGTTGTAA80.10350627506792598No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACTGTCGTTAT80.10350627506792598No Hit
CGGAAGGATCATTACCACACCAAAAAAACTCTCCACGTGAACCGTTGTAA80.10350627506792598No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTCGCTAT80.10350627506792598No Hit
CGGAAGGATCATTACCACACCAAAAAAACCTTCCACGTGAACCGTTGTAA80.10350627506792598No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACTGTCGTTAT80.10350627506792598No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACTGTCGTTAT80.10350627506792598No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)