FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOChi674.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOChi674.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5951
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAA233339.20349521088893No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC196633.03646445975466No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAACCGTATCAAC4507.561754327003865No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCACGTGAACTGTATTAAAA330.5545286506469501No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAC300.504116955133591No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA290.487313056629138No Hit
CGGAAGGATCATTACCACCTAAAAAACTTCCACGTGAACTGTATTAAAAC270.4537052596202319No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTTCCACGTGAACCGTTGTAA230.38648966560241976No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACTGTATTAAA200.33607797008906065No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCGAC190.31927407158460763No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAGCA180.3024701730801546No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACCGTATCAAC170.28566627457570154No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT160.2688623760712485No Hit
CGGAAGGATCATTACCACACCTAAAAAACCTCCACGTGAACTGTATTAAA160.2688623760712485No Hit
CGGAAGGATCATTAACACACCTAAAAAACTTCCACGTGAACTGTATTAAA140.23525457906234246No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAGCTGTATTAAA140.23525457906234246No Hit
CGGAAGGATCATTACCACACATAAAAAACTTCCACGTGAACTGTATTAAA140.23525457906234246No Hit
CGGAAGGATCATTACCACACCTAAAGAACTTCCACGTGAACTGTATTAAA140.23525457906234246No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC140.23525457906234246No Hit
CGGAAGGATCATTACCACACCTAGAAACTTTCCACGTGAACCGTATCAAC130.21845068055788947No Hit
CGGAAGGATCATTACCACACCTAAAAAACTCCCACGTGAACTGTATTAAA110.18484288354898337No Hit
CGGAAGGATCATTACCACGCCTAAAAAACTTCCACGTGAACTGTATTAAA110.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAGAAAACTTCCACGTGAACTGTATTAAA110.18484288354898337No Hit
CGGAAGGATCATTACCACACCTAAAAAAACTTCAACGTGAACTGTATCAA100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTTCACGTGAACCGTATCAAA100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAAAGCTTTCCACGTGAACCGTATCAAC100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTTCCACGTGAACCGTATCAA100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAC100.16803898504453033No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC100.16803898504453033No Hit
CGGAAGGATCATTACCACTCCAGCAGTGGATGTCTAGGCTCTGTCTCTTA100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCGCGTGAACTGTATTAAA100.16803898504453033No Hit
CGGAAGGATCATTACCACACCTAAGAACTTTCCACGTGAACCGTATCAAC90.1512350865400773No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAC90.1512350865400773No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAAG80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGC80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAC80.13443118803562426No Hit
CGGAAGGATCATTACCACCTAAAAACTATCCACGTGAACCGTATCAACCC80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATTAGA80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAC80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTGTCAAC80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAC80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGGACTGTATTAAA80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAAATGTATTAAA80.13443118803562426No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACCC80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA80.13443118803562426No Hit
CGGAAGGATCATTACCACACCTAAAGACTTTCCACGTGAACCGTATCAAC70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGCATTAAA70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAC70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGCGAACTGTATTAAA70.11762728953117123No Hit
CGGAAGGATCATACCACACCTAAAAAACTTCCACGTGAACTGTATTAAAA70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAGACTTCCACGTGAACTGTATTAAA70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAACTGTATCAAA70.11762728953117123No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAC70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAC70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAAACTTCCACGTGAATTGTATTAAA70.11762728953117123No Hit
CGGAAGGATCATTACCACACCTAAAAACTATCCACGTGAGCCGTATCAAC60.10082339102671821No Hit
CGGAAGGATCATTACCACACCCAAAAACTTTCCACGTGAACCGTATCAAC60.10082339102671821No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAACAA60.10082339102671821No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCATATCAAC60.10082339102671821No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)