FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH662.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH662.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2539
Sequences flagged as poor quality0
Sequence length301
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA118746.75068924773533No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT50019.692792437967704No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1234.844426939740055No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAA542.126821583300512No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAA471.8511224891689642No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCGTTAACCAA431.6935801496652227No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTATCAAAC301.1815675462780622No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAA240.9452540370224497No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT240.9452540370224497No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT220.866482867270579No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT170.669554942890902No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT120.47262701851122485No Hit
CGGAAGGATCATTACCACACCTAAAAAATTTCCACGTGAACCGTATCAAA120.47262701851122485No Hit
CGGAAGGATCATTACCACACCTAAAAAACTATCCACGTGAACCGTTAAGC70.27569909413154786No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTACATA70.27569909413154786No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAACCGTATCAAC70.27569909413154786No Hit
CGGAAGGATCATTACCACACCTAAAAACTCTCCACGTGAACCGTATCAAA60.23631350925561243No Hit
CGGAAGGATCATTACCAAACCTAAAAACTTTCCACGTGAACCGTATCAAA60.23631350925561243No Hit
CGGAAGGATCATTACCACGCCTAAAAACTTTCCACGTGAACCGTATCAAA60.23631350925561243No Hit
CGGAAGGATCATTAACACACATAAAAACTTTCCACGTGAACCGTATCAAA60.23631350925561243No Hit
CGGAAGGATCATTACCACACCAAAAACTTTCCACGTGAACCGTATCAAAC60.23631350925561243No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT50.19692792437967704No Hit
CGGAAGAATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA50.19692792437967704No Hit
CGGAAGGATCATTAACACACCTAAAAACTTTCCACGTGAACCGTATCAAC50.19692792437967704No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAG50.19692792437967704No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA50.19692792437967704No Hit
CGGAAGGATCATTACCACCTAAAAACTTTCCACGTGAACCGTATCAAACC40.15754233950374164No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATTAAA40.15754233950374164No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGGACCGTATCAAA40.15754233950374164No Hit
CGGAAGGATCATTACCACACCTAAAAACCTTCCACGTGAACCGTATCAAA40.15754233950374164No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACAGTTAACCAA40.15754233950374164No Hit
CGGAAGGATCATTAACACACAAAAAACTATCCACGTGAACCACTTTGTAT40.15754233950374164No Hit
CGGAAGGATCATTACCACACCTAAAAACTTCCCACGTGAACCGTATCAAA40.15754233950374164No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTTAATG40.15754233950374164No Hit
CGGAAAGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAGA30.11815675462780621No Hit
CGGAAGGATCATTACCACACCTAAAAACGTTCCACGTGAACCGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAGCCGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACATAAAAACTTTCCACGTGAAACGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGCGAACCGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACATAAAAAATTTCCACGTGAACCGTATCAAA30.11815675462780621No Hit
TGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAAACGTATCAAC30.11815675462780621No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATTG30.11815675462780621No Hit
CGGAAGGATCATTAACACACCAAAAACTATACACGTGAACCACTTTGTAT30.11815675462780621No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTATCAAA30.11815675462780621No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT30.11815675462780621No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTACCAAA30.11815675462780621No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)