FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH660.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH660.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2514
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT94737.66905330151153No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT85033.810660302307085No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC1003.977724741447892No Hit
CGGAAGGATCATTACCACGAGACAGCAGTGGATGTCTAGGCTCTGTCTCT542.1479713603818613No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAA401.591089896579157No Hit
CGGAAGGATCATTACCACTCGTCGGCAGCAGTGGATGTCTAGGCTCTGTC311.2330946698488463No Hit
CGGAAGGATCATTACCACACAAAAAAAACTTACCACGTGAATCTGTACTT150.5966587112171837No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTTAAACA140.5568814638027049No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA130.5171042163882259No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG110.4375497215592681No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT110.4375497215592681No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGGACCGTCAGAAAT110.4375497215592681No Hit
CGGAAGGATCATTACCACCAAAAAAACTTACCACGTGAATCTGTACTTTC100.3977724741447892No Hit
CGGAAGGATCATTACCACACCAAAGAAACTTACCACGTGAATCTGTACTT100.3977724741447892No Hit
CGGAAGGATCATTACCACACCAAAAAACTTACCACGTGAATCTGTACTTT90.35799522673031026No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAGCCGTCAGAAAT80.31821797931583135No Hit
CGGAAGGATCATTAACACACCAAAAAAACTTACCACGTGAATCTGTACTT70.27844073190135243No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAGTCTGTACTT70.27844073190135243No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT70.27844073190135243No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGCCAGAAAT60.23866348448687352No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAACCTGTACTT60.23866348448687352No Hit
CGGAAGGATCATTACCACACCAAAAAACTATCCACGTGAACCGTCAAAAA60.23866348448687352No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTC60.23866348448687352No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAGAT60.23866348448687352No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGCGAATCTGTACTT50.1988862370723946No Hit
CGGAAGGATCATTACCACACCAAAAAAAACTTACCACGTGAATCTGTACT50.1988862370723946No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCGGAAAT50.1988862370723946No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGCGAACCGTCAGAAAT50.1988862370723946No Hit
CGGAAGGATCATTACCACACCAAGAACAATCCACGTGAACCGTCAGAAAT50.1988862370723946No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGGATCTGTACTT50.1988862370723946No Hit
CGGAAGGATCATACCACACCAAAAACAATCCACGTGAACCGTCAGAAATA50.1988862370723946No Hit
CGGAAGGATCATTACCACACCAAAAAAGCTTACCACGTGAATCTGTACTT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCGAAAACAATCCACGTGAACCGTCAGAAAT40.15910898965791567No Hit
CGGAAGGATCATTACCACGCCAAAAAAACTTACCACGTGAATCTGTACTT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCGCGTGAATCTGTACTT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAAAGACAATCCACGTGAACCGTCAGAAAT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAGAAAAACTTACCACGTGAATCTGTACTT40.15910898965791567No Hit
CGGAAGGATCATTACCACGCCAAAAACAATCCACGTGAACCGTCAGAAAT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT40.15910898965791567No Hit
CGGAAGGATCATTACCACCGTCGGCAGCAGTGGATGTCTAGGCTCTGTCT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAAAACAATCCACGTGAACCGTCAGAAATA40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT40.15910898965791567No Hit
CGGAAGGATCATTACCACACCAAATAAACTTACCACGTGAATCTGTACTT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAGAAAACTTACCACGTGAATCTGTACTT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGACTCTGTACTT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCGCGTGAACCGTATCAAC30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACAGTCAGAAAT30.11933174224343676No Hit
CGGAAGGATCATTACCAAACCAAAAACAATCCACGTGAACCGTCAGAAAT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAGT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTTAATCTGTACTT30.11933174224343676No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTTAGAAAT30.11933174224343676No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)