FastQCFastQC Report
Tue 16 Jan 2024
000000000-LC922_l01_n01_ITS-OOATH652.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LC922_l01_n01_ITS-OOATH652.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3407
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT196957.7927795714705No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGAAAT49914.646316407396537No Hit
CGGAAGGATCATTACCACACCAAAAAAACTTACCACGTGAATCTGTACTT992.9057822130906956No Hit
CGGAAGGATCATTACCACACCTAAAAACTTTCCACGTGAACCGTATCAAC762.2307014969181096No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCGTCAAAA681.995890813031993No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAGCCACTTTGTAT421.2327560904021133No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCACTTTGTAT381.1153507484590548No Hit
CGGAAGGATCATTACCACACAAAAAACTATCCACGTGAACCACTTTGTAT300.8805400645729381No Hit
CGGAAGGATCATTACCACACCAAAAACTATACACGTGAACCACTTTGTAT210.6163780452010567No Hit
CGGAAGGATCATTACCACCAAAAACTATCCACGTGAACCACTTTGTATAG170.49897270325799825No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACAACTTTGTAT140.4109186968007044No Hit
CGGAAGGATCATTAACACACCAAAAACTATCCACGTGAACCACTTTGTAT140.4109186968007044No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTCGTAT120.3522160258291752No Hit
CGGAAGGATCATTACCACGCCAAAAACTATCCACGTGAACCACTTTGTAT100.293513354857646No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCGCGTGAACCACTTTGTAT100.293513354857646No Hit
CGGAAGGATCATTACCACACCAAAAAAACTATCCACGTGAACCACTTTGT100.293513354857646No Hit
CGGAAGGATCATTACCACACCAAAAACTACCCACGTGAACCACTTTGTAT90.26416201937188144No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGCGAACCACTTTGTAT90.26416201937188144No Hit
CGGAAGGATCATTACCACACAAAAAACAATCCACGTGAACCGTCAGAAAT90.26416201937188144No Hit
CGGAAGGATCATTACCACACCAAGAACTATCCACGTGAACCACTTTGTAT80.2348106838861168No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTGT80.2348106838861168No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGGACCACTTTGTAT70.2054593484003522No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAC60.1761080129145876No Hit
CGGAAGGATCATTAACACACCAAAAACAATCCACGTGAACCGTCAGAAAT60.1761080129145876No Hit
CGGAAGGATCATTACCCCACCAAAAACTATCCACGTGAACCACTTTGTAT60.1761080129145876No Hit
CGGAAGGATCATTACCACACCAAAAACAACCCACGTGAACCGTCAGAAAT60.1761080129145876No Hit
CGGAAGGATCATTACCACACCAAAAACAGTCCACGTGAACCGTCAGAAAT60.1761080129145876No Hit
CGGAAGGATCATTACCACACCGAAAACTATCCACGTGAACCACTTTGTAT60.1761080129145876No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGCTTTGTAT50.146756677428823No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGCAT50.146756677428823No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCGTCAGAAAT50.146756677428823No Hit
CGGAAGGATCATTACCACACCAGAAACTATCCACGTGAACCACTTTGTAT50.146756677428823No Hit
CGGAAGAATCATTACCACACCAAAAACTATCCACGTGAACCACTTTGTAT50.146756677428823No Hit
CGGAAGGATCATTACCACACCAAAAACTATCCACGTGAACCACCTTGTAT50.146756677428823No Hit
CGGAAGGATCATTATCACACCAAAAACTATCCACGTGAACCACTTTGTAT50.146756677428823No Hit
CGGAAGGATCATTACCACACCAAAAGCAATCCACGTGAACCGTCAGAAAT40.1174053419430584No Hit
CGGAAGGATCTTACCACACCAAAAACTATCCACGTGAACCACTTTGTATA40.1174053419430584No Hit
CGGAAGGATCATTACCACACCAAAGACTATCCACGTGAACCACTTTGTAT40.1174053419430584No Hit
CGGAAGGATCATTACCACCAAAAACAATCCACGTGAACCGTCAGAAATAG40.1174053419430584No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCAGGAAT40.1174053419430584No Hit
CGGAAGGATCATTACCACACCAAAAACAATACACGTGAACCGTCAGAAAT40.1174053419430584No Hit
CGGAAGGATCATTACCACACCAAAAACAATCCACGTGAACCGTCATAAAT40.1174053419430584No Hit
CGGAAGGATCATTACCACACCAAAAGCTATCCACGTGAACCACTTTGTAT40.1174053419430584No Hit
CGGAAGGATCATTACCACACCAAAAACTGTCCACGTGAACCACTTTGTAT40.1174053419430584No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)